Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027193.1-P | Field mustard | mitochondrion, plastid | 98.68 | 98.68 |
| CDX97719 | Canola | mitochondrion | 98.68 | 98.68 |
| AT3G16070.1 | Thale cress | mitochondrion | 82.24 | 83.33 |
| CDY50621 | Canola | mitochondrion, nucleus | 49.34 | 79.79 |
| KRH44358 | Soybean | mitochondrion | 31.58 | 28.74 |
| PGSC0003DMT400042550 | Potato | mitochondrion | 30.26 | 25.27 |
| KRH23447 | Soybean | mitochondrion | 34.87 | 24.54 |
| KRH09868 | Soybean | mitochondrion | 34.87 | 24.42 |
| KRH47035 | Soybean | mitochondrion | 32.24 | 22.9 |
| CDY39626 | Canola | mitochondrion, nucleus, plastid | 26.32 | 21.86 |
| Solyc03g120790.1.1 | Tomato | nucleus | 32.89 | 21.83 |
| CDY36540 | Canola | mitochondrion | 25.66 | 21.43 |
| PGSC0003DMT400006511 | Potato | cytosol | 32.24 | 21.4 |
| PGSC0003DMT400089587 | Potato | cytosol | 32.24 | 21.4 |
Protein Annotations
| EnsemblPlants:CDY30132 | EnsemblPlantsGene:GSBRNA2T00044707001 | PANTHER:PTHR35461 | PANTHER:PTHR35461:SF1 | ProteinID:CDY30132 | ProteinID:CDY30132.1 |
| UniParc:UPI0004EE1FAB | UniProt:A0A078GY39 | MapMan:35.2 | : | : | : |
Description
BnaC05g37300DBnaC05g37300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GY39]
Coordinates
chrLK032249:-:279459..279917
Molecular Weight (calculated)
17590.8 Da
IEP (calculated)
6.783
GRAVY (calculated)
-0.625
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MFQKTNSFFH RTLHSLKSII LRAGKKLSKP KTHFSCTFCR SNSLDGDDFY ASFLNIWESD LENSIGGGGP LKLEQKTQEH VQDHQEKKTE ACSSRLSRDC
101: DTMEKKIKEM YVIETGDIEQ ALDVEEALHY YSRLRSPVYL NIVDKFLNDL YA
101: DTMEKKIKEM YVIETGDIEQ ALDVEEALHY YSRLRSPVYL NIVDKFLNDL YA
001: MFQKTNSFFH RTLHSLKSII IRAGKKLPRP KTHFSCTFCR SNSLDGDNIY ASFLNIWESD LENSIEGPLK LEHKVQEQEQ YHQVKKTEAC SSYSSRDCDT
101: MEKKINEMYM TETVDIEQAL DVEEALHYYS RISSPVYLNI VDKFFTDLYS
101: MEKKINEMYM TETVDIEQAL DVEEALHYYS RISSPVYLNI VDKFFTDLYS
Arabidopsis Description
LOW protein: ATP-dependent RNA helicase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LW80]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.