Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13289 | Canola | nucleus | 75.57 | 76.96 |
| CDX86738 | Canola | nucleus | 76.02 | 76.36 |
| AT4G22950.1 | Thale cress | nucleus | 75.57 | 76.26 |
| Bra029424.1-P | Field mustard | nucleus | 58.82 | 75.14 |
| KRH57267 | Soybean | nucleus | 58.82 | 57.27 |
| VIT_02s0025g04650.t01 | Wine grape | nucleus | 55.2 | 57.01 |
| KRH03997 | Soybean | nucleus | 57.47 | 56.95 |
| AT2G45660.1 | Thale cress | nucleus | 52.94 | 54.67 |
| AT5G62165.2 | Thale cress | nucleus | 49.77 | 52.38 |
| AT5G51860.1 | Thale cress | nucleus | 42.53 | 44.55 |
| AT5G51870.3 | Thale cress | nucleus | 43.44 | 41.92 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:826795 | ProteinID:AEE83062.1 | Symbol:AGL14 | EMBL:AK230464 |
| ProteinID:ANM67706.1 | ArrayExpress:AT4G11880 | EnsemblPlantsGene:AT4G11880 | RefSeq:AT4G11880 | TAIR:AT4G11880 | RefSeq:AT4G11880-TAIR-G |
| EnsemblPlants:AT4G11880.1 | TAIR:AT4G11880.1 | Unigene:At.42992 | ProteinID:CAB44326.1 | ProteinID:CAB78231.1 | ncoils:Coil |
| GO:GO:0000003 | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006810 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009791 | GO:GO:0009908 |
| GO:GO:0009987 | GO:GO:0010076 | GO:GO:0010082 | GO:GO:0010228 | GO:GO:0040007 | GO:GO:0040008 |
| GO:GO:0044212 | GO:GO:0045944 | GO:GO:0046983 | GO:GO:2000012 | InterPro:IPR002100 | InterPro:IPR002487 |
| InterPro:IPR036879 | InterPro:MADS_MEF2-like | RefSeq:NP_001319907.1 | RefSeq:NP_192925.1 | PFAM:PF00319 | PFAM:PF01486 |
| PO:PO:0009005 | PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF146 | UniProt:Q38838 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox |
| InterPro:TF_MADSbox_sf | EMBL:U20184 | UniParc:UPI0000125682 | SEG:seg | : | : |
Description
AGL14Agamous-like MADS-box protein AGL14 [Source:UniProtKB/Swiss-Prot;Acc:Q38838]
Coordinates
chr4:+:7142922..7147391
Molecular Weight (calculated)
25493.6 Da
IEP (calculated)
9.590
GRAVY (calculated)
-0.818
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRGKTEMKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFSSS SSIPKTVERY QKRIQDLGSN HKRNDNSQQS KDETYGLARK
101: IEHLEISTRK MMGEGLDASS IEELQQLENQ LDRSLMKIRA KKYQLLREET EKLKEKERNL IAENKMLMEK CEMQGRGIIG RISSSSSTSE LDIDDNEMEV
201: VTDLFIGPPE TRHFKKFPPS N
101: IEHLEISTRK MMGEGLDASS IEELQQLENQ LDRSLMKIRA KKYQLLREET EKLKEKERNL IAENKMLMEK CEMQGRGIIG RISSSSSTSE LDIDDNEMEV
201: VTDLFIGPPE TRHFKKFPPS N
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.