Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10829 | Canola | nucleus | 26.94 | 85.51 |
| CDY41268 | Canola | nucleus | 26.94 | 85.51 |
| Bra019343.1-P | Field mustard | nucleus | 85.39 | 85.39 |
| CDX98780 | Canola | nucleus | 84.47 | 84.47 |
| CDY68007 | Canola | nucleus | 57.53 | 84.0 |
| AT4G11880.1 | Thale cress | nucleus | 76.26 | 75.57 |
| CDX76346 | Canola | nucleus | 75.34 | 74.66 |
| CDY55821 | Canola | nucleus | 75.34 | 74.66 |
| Bra020826.1-P | Field mustard | nucleus | 48.4 | 72.6 |
| AT2G45660.1 | Thale cress | nucleus | 56.62 | 57.94 |
| VIT_02s0025g04650.t01 | Wine grape | nucleus | 56.62 | 57.94 |
| KRH03997 | Soybean | nucleus | 56.62 | 55.61 |
| KRH57267 | Soybean | nucleus | 57.53 | 55.51 |
| AT5G62165.2 | Thale cress | nucleus | 50.68 | 52.86 |
| AT5G51860.1 | Thale cress | nucleus | 42.01 | 43.6 |
| AT5G51870.3 | Thale cress | nucleus | 42.92 | 41.05 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:828394 | UniProt:A0A178V3F3 | ProteinID:AEE84684.1 | EMBL:AF312664 |
| Symbol:AGL19 | ProteinID:ANM66284.1 | ArrayExpress:AT4G22950 | EnsemblPlantsGene:AT4G22950 | RefSeq:AT4G22950 | TAIR:AT4G22950 |
| RefSeq:AT4G22950-TAIR-G | EnsemblPlants:AT4G22950.1 | TAIR:AT4G22950.1 | EMBL:AY142523 | ProteinID:CAA19810.1 | ProteinID:CAB79250.1 |
| ncoils:Coil | GO:GO:0000003 | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009791 | GO:GO:0009908 |
| GO:GO:0009987 | GO:GO:0010048 | GO:GO:0045944 | GO:GO:0046983 | GO:GO:0048510 | InterPro:IPR002100 |
| InterPro:IPR002487 | InterPro:IPR036879 | InterPro:MADS_MEF2-like | RefSeq:NP_001320037.1 | RefSeq:NP_194026.1 | UniProt:O82743 |
| ProteinID:OAO99592.1 | PFAM:PF00319 | PFAM:PF01486 | PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000037 |
| PO:PO:0000293 | PO:PO:0006036 | PO:PO:0007115 | PO:PO:0007131 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009025 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020038 | PO:PO:0020131 | PO:PO:0025022 |
| PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF341 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_Kbox | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI00000017FC |
| SEG:seg | : | : | : | : | : |
Description
AGL19Agamous-like MADS-box protein AGL19 [Source:UniProtKB/Swiss-Prot;Acc:O82743]
Coordinates
chr4:-:12023824..12028004
Molecular Weight (calculated)
25049.9 Da
IEP (calculated)
9.962
GRAVY (calculated)
-0.803
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRGKTEMKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALVIFSP RSKLYEFSSS SIAATIERYQ RRIKEIGNNH KRNDNSQQAR DETSGLTKKI
101: EQLEISKRKL LGEGIDACSI EELQQLENQL DRSLSRIRAK KYQLLREEIE KLKAEERNLV KENKDLKEKW LGMGTATIAS SQSTLSSSEV NIDDNMEVET
201: GLFIGPPETR QSKKFPPQN
101: EQLEISKRKL LGEGIDACSI EELQQLENQL DRSLSRIRAK KYQLLREEIE KLKAEERNLV KENKDLKEKW LGMGTATIAS SQSTLSSSEV NIDDNMEVET
201: GLFIGPPETR QSKKFPPQN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.