Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69854 | Canola | cytosol, nucleus, plastid | 77.16 | 78.76 |
| CDX96983 | Canola | cytosol | 76.14 | 77.72 |
| Bra009050.1-P | Field mustard | cytosol | 49.24 | 76.38 |
| AT5G65030.1 | Thale cress | mitochondrion, nucleus | 61.42 | 59.9 |
| KRG97587 | Soybean | nucleus | 35.03 | 35.03 |
| PGSC0003DMT400056116 | Potato | cytosol | 34.52 | 34.87 |
| PGSC0003DMT400004772 | Potato | cytosol | 35.53 | 34.15 |
| KRH31287 | Soybean | cytosol | 34.01 | 33.5 |
| PGSC0003DMT400004773 | Potato | cytosol | 20.3 | 32.52 |
| Solyc03g078620.1.1 | Tomato | cytosol | 31.98 | 31.19 |
| PGSC0003DMT400004770 | Potato | cytosol | 20.81 | 30.83 |
| Solyc04g055130.1.1 | Tomato | nucleus | 19.8 | 30.47 |
| PGSC0003DMT400004769 | Potato | cytosol | 12.18 | 30.0 |
| Solyc04g055140.1.1 | Tomato | cytosol | 19.29 | 28.15 |
| Solyc04g055150.1.1 | Tomato | nucleus | 18.78 | 27.41 |
Protein Annotations
| ArrayExpress:AT5G10210 | EMBL:BT010767 | EMBL:BT010993 | EnsemblPlants:AT5G10210.1 | EnsemblPlantsGene:AT5G10210 | EntrezGene:830885 |
| GO:GO:0008150 | PANTHER:PTHR35503 | PANTHER:PTHR35503:SF2 | PO:PO:0009005 | PO:PO:0020100 | ProteinID:AED91508.1 |
| ProteinID:CAB92062.1 | RefSeq:AT5G10210 | RefSeq:AT5G10210-TAIR-G | RefSeq:NP_196583.1 | TAIR:AT5G10210 | TAIR:AT5G10210.1 |
| Unigene:At.32405 | UniParc:UPI00000A2499 | UniProt:Q9LX09 | MapMan:35.2 | : | : |
Description
At5g10210 [Source:UniProtKB/TrEMBL;Acc:Q9LX09]
Coordinates
chr5:+:3206140..3207136
Molecular Weight (calculated)
22578.4 Da
IEP (calculated)
7.640
GRAVY (calculated)
-0.263
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIVENIRSL KFEVKIVEAR NVELKSSPTT LFVRFYLHAG NNSKIELNTP EIRSRSDCEV ISWNQSFGLE CQGNETAVEE LKQQSVVFEL RRRKTTPFLK
101: KWSKSELVGR GKIFWKSVIE TDGMEIERFV VMDETKDHVL EDCDKHKPLL LKIALKVQAS KIVNTKRVED LCECKDCRTC NCVDYEAFVV ACALAGI
101: KWSKSELVGR GKIFWKSVIE TDGMEIERFV VMDETKDHVL EDCDKHKPLL LKIALKVQAS KIVNTKRVED LCECKDCRTC NCVDYEAFVV ACALAGI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.