Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80475 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 58.02 | 55.47 |
| Bra009804.1-P | Field mustard | extracellular | 39.69 | 52.0 |
| AT4G25760.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 39.69 | 40.31 |
| AT2G24762.1 | Thale cress | golgi, plasma membrane, plastid | 45.04 | 37.82 |
| Solyc12g096490.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid | 45.04 | 35.98 |
| AT4G31730.1 | Thale cress | endoplasmic reticulum, plasma membrane, plastid | 42.75 | 35.44 |
| AT5G57685.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 39.69 | 35.14 |
| PGSC0003DMT400075273 | Potato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 39.69 | 34.44 |
| Solyc12g096480.1.1 | Tomato | plastid | 37.4 | 32.24 |
| Solyc08g006520.1.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane, plastid | 43.51 | 32.02 |
| PGSC0003DMT400067619 | Potato | mitochondrion | 43.51 | 31.32 |
| KRH15701 | Soybean | plastid | 41.98 | 30.22 |
| KRH05332 | Soybean | plastid | 39.69 | 29.55 |
| PGSC0003DMT400075274 | Potato | plastid | 32.06 | 26.75 |
Protein Annotations
| MapMan:35.1 | EntrezGene:832562 | ProteinID:AED93378.1 | EMBL:AF069716 | ArrayExpress:AT5G24920 | EnsemblPlantsGene:AT5G24920 |
| RefSeq:AT5G24920 | TAIR:AT5G24920 | RefSeq:AT5G24920-TAIR-G | EnsemblPlants:AT5G24920.1 | TAIR:AT5G24920.1 | Symbol:AtGDU5 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006865 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0080143 | RefSeq:NP_197874.2 | PO:PO:0000293 | PANTHER:PTHR33228 | PANTHER:PTHR33228:SF16 | UniProt:Q3E965 |
| TMHMM:TMhelix | UniParc:UPI0001505850 | SEG:seg | : | : | : |
Description
GDU5Protein GLUTAMINE DUMPER 5 [Source:UniProtKB/Swiss-Prot;Acc:Q3E965]
Coordinates
chr5:+:8584535..8585297
Molecular Weight (calculated)
14684.8 Da
IEP (calculated)
5.935
GRAVY (calculated)
-0.268
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MRQFPSIRGN INEKMMTTMV ESQTRSPWRT PVPYLFGGLA AMLGLIAFAL LLLACSYWRL SRQTEDEEKQ TESGEKVVAK AFEEKILVIM AGQNNPTFLA
101: TPVAAKICLD CVNMEKKEGQ NGESKVTEEN H
101: TPVAAKICLD CVNMEKKEGQ NGESKVTEEN H
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.