Factsheet for ATCG00140.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

endoplasmic reticulum 6
golgi 5
extracellular 5
vacuole 5
plasma membrane 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CAA33991	Rice	endoplasmic reticulum, plasma membrane, vacuole	97.53	97.53
HORVU0Hr1G034610.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	97.53	97.53
HORVU0Hr1G037590.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	97.53	97.53
HORVU6Hr1G049160.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	97.53	97.53
TraesCS5D01G196700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	97.53	97.53
TraesCS1D01G180800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	97.53	97.53
AGP50750	Barley	plastid	97.53	97.53
TraesCSU01G271100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	96.3	96.3
TraesCSU01G269000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	96.3	96.3
TraesCS5D01G011200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	96.3	96.3
TraesCS1D01G070600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	95.06	95.06
TraesCSU01G174300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	95.06	95.06
TraesCS5D01G459200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	95.06	95.06
Solyc09g059660.1.1	Tomato	plastid	93.83	93.83
TraesCS5D01G220200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	93.83	93.83
TraesCS6D01G021800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	92.59	92.59
TraesCS4D01G042700.1	Wheat	vacuole	91.36	91.36
TraesCS7A01G363200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	90.12	90.12
KRH55079	Soybean	cytosol, plasma membrane, plastid	66.67	84.38
TraesCS1B01G239600.1	Wheat	golgi, plasma membrane	79.01	84.21
CDY21188	Canola	endoplasmic reticulum, extracellular, vacuole	100.0	83.51
KRH57995	Soybean	endoplasmic reticulum, extracellular	74.07	72.29
VIT_10s0003g04310.t01	Wine grape	cytosol	53.09	69.35
Solyc07g021260.1.1	Tomato	cytosol	51.85	61.76
EER95386	Sorghum	endoplasmic reticulum, plasma membrane	74.07	60.61

Protein Annotations

MapMan:1.1.9.1.4	Gene3D:1.20.20.10	EntrezGene:844788	UniProt:A0A1B1W4S3	ProteinID:ANW47777.1	ArrayExpress:ATCG00140
EnsemblPlantsGene:ATCG00140	RefSeq:ATCG00140	TAIR:ATCG00140	RefSeq:ATCG00140-TAIR-G	EnsemblPlants:ATCG00140.1	TAIR:ATCG00140.1
Symbol:ATPH	InterPro:ATP_synth_F0_csu	InterPro:ATP_synth_F0_csu_DDCD_BS	InterPro:ATP_synth_F0_csu_sf	InterPro:ATP_synth_csu_bac/chlpt	InterPro:ATPase_proteolipid_c-like_dom
ProteinID:BAA84372.1	InterPro:F/V-ATP_Csub_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006754
GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0008152	GO:GO:0008289	GO:GO:0009058
GO:GO:0009507	GO:GO:0009534	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009987
GO:GO:0015078	GO:GO:0015986	GO:GO:0015991	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0033177	GO:GO:0045263	GO:GO:0046933	InterPro:IPR038662	HAMAP:MF_01396
RefSeq:NP_051046.1	UniProt:P56760	PFAM:PF00137	PRINTS:PR00124	ScanProsite:PS00605	PANTHER:PTHR10031
PANTHER:PTHR10031:SF6	SUPFAM:SSF81333	TIGRFAMs:TIGR01260	TMHMM:TMhelix	UniParc:UPI0000126591	SEG:seg

Description

ATPHATP synthase subunit c, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4S3]

Coordinates

chrPt:-:13262..13507

Molecular Weight (calculated)

7976.9 Da

IEP (calculated)

4.628

GRAVY (calculated)

0.999

Length

81 amino acids

Sequence
(BLAST)

1: MNPLVSAASV IAAGLAVGLA SIGPGVGQGT AAGQAVEGIA RQPEAEGKIR GTLLLSLAFM EALTIYGLVV ALALLFANPF V

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.