Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74067 | Canola | nucleus | 85.98 | 82.51 |
| CDY08019 | Canola | mitochondrion, nucleus | 88.78 | 65.52 |
| Bra023945.1-P | Field mustard | cytosol | 62.15 | 47.67 |
| TraesCS7A01G111400.1 | Wheat | nucleus | 52.34 | 43.92 |
| TraesCS7D01G106500.1 | Wheat | nucleus | 50.47 | 42.35 |
| TraesCS7A01G405900.1 | Wheat | nucleus | 49.07 | 41.83 |
| Bra011462.1-P | Field mustard | nucleus | 49.53 | 41.73 |
| TraesCS7B01G009300.1 | Wheat | nucleus | 50.47 | 41.7 |
| EER97413 | Sorghum | nucleus | 49.53 | 41.57 |
| Zm00001d019181_P001 | Maize | nucleus | 49.53 | 41.25 |
| Zm00001d021873_P001 | Maize | nucleus | 49.53 | 41.09 |
| TraesCS7B01G305800.3 | Wheat | nucleus | 47.66 | 40.96 |
| EER96069 | Sorghum | nucleus | 47.66 | 40.0 |
| Os07t0213400-01 | Rice | nucleus, plastid | 49.53 | 39.85 |
| PGSC0003DMT400013080 | Potato | nucleus | 47.2 | 39.15 |
| Os08t0192200-01 | Rice | nucleus | 16.82 | 37.89 |
| HORVU7Hr1G023800.2 | Barley | cytosol | 26.64 | 36.77 |
| HORVU7Hr1G094990.2 | Barley | nucleus | 46.73 | 35.84 |
| KRH10674 | Soybean | nucleus | 48.13 | 34.33 |
| KRH21674 | Soybean | nucleus | 47.2 | 34.24 |
| HORVU7Hr1G023920.2 | Barley | cytosol, nucleus | 31.31 | 33.5 |
| TraesCS5A01G215300.3 | Wheat | nucleus | 51.4 | 33.13 |
| TraesCS5D01G216700.1 | Wheat | nucleus | 50.93 | 32.63 |
| Solyc01g106560.2.1 | Tomato | nucleus | 46.73 | 32.57 |
| HORVU7Hr1G023780.5 | Barley | cytosol | 16.82 | 30.0 |
| VIT_03s0088g01000.t01 | Wine grape | nucleus | 51.4 | 26.19 |
| GSMUA_Achr6P16520_001 | Banana | nucleus | 24.77 | 21.29 |
| HORVU7Hr1G023790.1 | Barley | cytosol, mitochondrion, nucleus | 7.48 | 19.51 |
Protein Annotations
Description
AT4G33690 (E=2e-021) | unknown protein
Coordinates
chrA03:+:15439373..15440228
Molecular Weight (calculated)
24955.3 Da
IEP (calculated)
10.539
GRAVY (calculated)
-1.509
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLETENRIA SVLLREAAEL RRRAERDGVR AYLEKPIVRH RPNSRFLTAT VLGVQQSNRA VETNEMWKAR EKEIELESER RKRKSREESS SSRMKRSSLD
101: KRCSSSNDEK KVTHPSDDED EGLGDDEIES FLQSRNKRGR GSIGPRMDET GPYLPAEKVD ELQSSGTREW KVVLGPERPP SQRQHSDDKE PGRRIKKYSK
201: KDKKTKKKRK RDKH
101: KRCSSSNDEK KVTHPSDDED EGLGDDEIES FLQSRNKRGR GSIGPRMDET GPYLPAEKVD ELQSSGTREW KVVLGPERPP SQRQHSDDKE PGRRIKKYSK
201: KDKKTKKKRK RDKH
001: MDLETENRIA SILLREAAEL RRQAEKDGVR AYLEKPNVRH RPNSRFLTAT VLGVQQANKA VETNEMWSLR SKEIEFGERL KRKSRDESSN GQSEQNNRRD
101: FLKRCTSVDE NVTTTSLSPS SSRSRSKRWQ SEDDDDEGLG DVEVKTFLQS RVKRGRGSVG AMMDEPLPCL PERELSRTSD TGDRKLVIQP ERSPLLRRRT
201: DSSSSDEEEV YKRAHRKRKE HKKKLSKKHK SKEKKRDRKK RKYGRD
101: FLKRCTSVDE NVTTTSLSPS SSRSRSKRWQ SEDDDDEGLG DVEVKTFLQS RVKRGRGSVG AMMDEPLPCL PERELSRTSD TGDRKLVIQP ERSPLLRRRT
201: DSSSSDEEEV YKRAHRKRKE HKKKLSKKHK SKEKKRDRKK RKYGRD
Arabidopsis Description
At4g33690 [Source:UniProtKB/TrEMBL;Acc:Q6NPE9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.