Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037652.1-P | Field mustard | cytosol, plastid | 5.42 | 6.14 |
| Bra040653.1-P | Field mustard | mitochondrion | 2.17 | 4.31 |
| Bra037654.1-P | Field mustard | nucleus | 2.17 | 4.05 |
| Bra000252.1-P | Field mustard | cytosol | 2.39 | 4.04 |
| Bra028465.1-P | Field mustard | cytosol | 1.95 | 3.86 |
| Bra004826.1-P | Field mustard | nucleus | 1.95 | 3.72 |
| PGSC0003DMT400093177 | Potato | cytosol | 1.08 | 3.7 |
| Bra037655.1-P | Field mustard | nucleus | 1.95 | 3.69 |
| Bra004828.1-P | Field mustard | nucleus | 1.95 | 3.56 |
| Bra037653.1-P | Field mustard | mitochondrion, nucleus | 1.95 | 3.53 |
| Bra000352.1-P | Field mustard | nucleus | 1.74 | 3.31 |
| PGSC0003DMT400048642 | Potato | cytosol | 0.22 | 1.67 |
Protein Annotations
Description
AT2G27660 (E=2e-118) | DC1 domain-containing protein
Coordinates
chrA07:-:10631133..10632518
Molecular Weight (calculated)
49007.0 Da
IEP (calculated)
4.078
GRAVY (calculated)
-1.100
Length
461 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRLNRPENN PTRPVGNPNR PIGQNAAVYG PRRQNNNLGC NGPIGPITQS FDQGSMEGSV FDGSAVNEEF DGEVDVEIDY EANGYEGTED GEPYDGEQDV
101: DGNGLEIMAN GGDANDVAYS ESEFGGSSDA RSQSNDLSDQ ADLYPLSVRT NFGPGGGRKQ NSSPNSPAPA RSKNIGRNGR GGSRLQGSKN PIENPRGPQT
201: KRLQNVRNNA IRAGGPGGFN RPRDLTAFNG PQGFNGPSGG PSNVIDNGGN NEVDGNEMYA GEYGATYGDE GDCDFEAGGD FVDDGCDQAY DEDDFECYTD
301: ITGGSESMYN EDESYETMDD SQYNDEPNNQ YLSMVEPVGG PGMNNQNQYG QTNRPRRMGR YGRGGTKNMN RYGNMNQGTN STQPRTMGRS VQRRPNGGQY
401: RANGRPNGPS GNTMMNSMVQ GLCQGLAMNM LAGDGSDVNS GAGDSGGSSI FGGLLGGESE F
101: DGNGLEIMAN GGDANDVAYS ESEFGGSSDA RSQSNDLSDQ ADLYPLSVRT NFGPGGGRKQ NSSPNSPAPA RSKNIGRNGR GGSRLQGSKN PIENPRGPQT
201: KRLQNVRNNA IRAGGPGGFN RPRDLTAFNG PQGFNGPSGG PSNVIDNGGN NEVDGNEMYA GEYGATYGDE GDCDFEAGGD FVDDGCDQAY DEDDFECYTD
301: ITGGSESMYN EDESYETMDD SQYNDEPNNQ YLSMVEPVGG PGMNNQNQYG QTNRPRRMGR YGRGGTKNMN RYGNMNQGTN STQPRTMGRS VQRRPNGGQY
401: RANGRPNGPS GNTMMNSMVQ GLCQGLAMNM LAGDGSDVNS GAGDSGGSSI FGGLLGGESE F
001: MGKPTTQNNS FINHFSHPHR LQLTPATSSP PCSACKLTGG NGRVYSCRPC NFSLHESCSK MKQVITHPSH PSHTLSLLVA PVYDGGYFNC DGCGIHGTGF
101: SYQCSVCDFD IHALCAYKPL SIIHKSHPQH NLKLAFQSPY GANKGFSCDI CRKIGKNQWL YRCIPCEFDA HVGCITGPNP HLLQHSTSAP NPHTHHAGHP
201: QHQNSLPVPN QGSNRVRPMP MTRPNRTINP NRPIAQNAAV NGPRRQNNNL GYNAQVGPNG PNELTGQGSM DGSGYNGSAS ATNKEFDVDV DVDVDVDVDV
301: DVDVEVEYEG DVYVEEANDE GEDVDGNDEG EDVDGNGLEI VACVDNLSVA YSESDFGSSS DARSQCNDLS DADLYPLSLD NTQGPRPVRM NQGSGGGRKK
401: NTNQNGQASR SKKIVGNGPR GGLQGSNSPI QSPRGPQTRR VQNVRNNPTR GRGGAVSVRV NRPRDPSAFI APQGFNGPSG GPSNAIDSGA NNDNYNEVEG
501: TDVYVGEDNV GYEESYGGGD GDCDFEVGGD FGDEGYDQSY DDNYGENDFE SYSDITGGSE SMYEDGESYG TMNDSQYSGF NEEPNNQYAP MVGPVGGPGM
601: NNQNQYGQNG RPRNVGMYGR GGTNMNRYGN VNQGANRMQP RTMGGRPLQY RPNGRPNMAN GGVPNGPLGL GTPMLMNTMV QGLCQSFGMN MLIGGGGDAN
701: GGAGDGGGGG FFGGETEF
101: SYQCSVCDFD IHALCAYKPL SIIHKSHPQH NLKLAFQSPY GANKGFSCDI CRKIGKNQWL YRCIPCEFDA HVGCITGPNP HLLQHSTSAP NPHTHHAGHP
201: QHQNSLPVPN QGSNRVRPMP MTRPNRTINP NRPIAQNAAV NGPRRQNNNL GYNAQVGPNG PNELTGQGSM DGSGYNGSAS ATNKEFDVDV DVDVDVDVDV
301: DVDVEVEYEG DVYVEEANDE GEDVDGNDEG EDVDGNGLEI VACVDNLSVA YSESDFGSSS DARSQCNDLS DADLYPLSLD NTQGPRPVRM NQGSGGGRKK
401: NTNQNGQASR SKKIVGNGPR GGLQGSNSPI QSPRGPQTRR VQNVRNNPTR GRGGAVSVRV NRPRDPSAFI APQGFNGPSG GPSNAIDSGA NNDNYNEVEG
501: TDVYVGEDNV GYEESYGGGD GDCDFEVGGD FGDEGYDQSY DDNYGENDFE SYSDITGGSE SMYEDGESYG TMNDSQYSGF NEEPNNQYAP MVGPVGGPGM
601: NNQNQYGQNG RPRNVGMYGR GGTNMNRYGN VNQGANRMQP RTMGGRPLQY RPNGRPNMAN GGVPNGPLGL GTPMLMNTMV QGLCQSFGMN MLIGGGGDAN
701: GGAGDGGGGG FFGGETEF
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZUW8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.