Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83428 | Canola | nucleus | 96.69 | 97.1 |
| Bra040653.1-P | Field mustard | mitochondrion | 60.74 | 63.36 |
| Bra037653.1-P | Field mustard | mitochondrion, nucleus | 65.7 | 62.35 |
| Bra037654.1-P | Field mustard | nucleus | 57.02 | 55.87 |
| Bra004828.1-P | Field mustard | nucleus | 57.85 | 55.34 |
| Bra028465.1-P | Field mustard | cytosol | 51.65 | 53.65 |
| Bra004826.1-P | Field mustard | nucleus | 52.89 | 52.89 |
| Bra037655.1-P | Field mustard | nucleus | 50.0 | 49.59 |
| Solyc01g073860.2.1 | Tomato | cytosol | 31.82 | 32.63 |
| Solyc01g073850.1.1 | Tomato | cytosol | 14.88 | 32.43 |
| PGSC0003DMT400016180 | Potato | cytosol | 16.53 | 24.69 |
| Bra000252.1-P | Field mustard | cytosol | 27.27 | 24.26 |
| Bra037652.1-P | Field mustard | cytosol, plastid | 25.21 | 14.99 |
| Bra012008.1-P | Field mustard | nucleus | 3.31 | 1.74 |
Protein Annotations
Description
AT2G44380 (E=4e-099) | DC1 domain-containing protein
Coordinates
chrA03:-:10701323..10702051
Molecular Weight (calculated)
27739.9 Da
IEP (calculated)
6.807
GRAVY (calculated)
-0.584
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRKPVNRP SVKHPSHKHP LHIFKAQEED EIICSGCELE LTGEAFKCTK SDCDYFLHKS CFDLPRELNH KSHPNHPLTL LHSPPYESNA YGCDACGQYG
101: SSFIYHCSKC QYDVHVGCAF LPEILEREDH EHKLTLVFNS PCKGREGMVF MCDVCKETVS ENLWVYHCKV CDYGTHVHSC AVYENHEAKR GGGGEEEAVL
201: EALRMESLRN ARMELANMRI SNKINNSVIH FGDEPRYHWV RK
101: SSFIYHCSKC QYDVHVGCAF LPEILEREDH EHKLTLVFNS PCKGREGMVF MCDVCKETVS ENLWVYHCKV CDYGTHVHSC AVYENHEAKR GGGGEEEAVL
201: EALRMESLRN ARMELANMRI SNKINNSVIH FGDEPRYHWV RK
001: MASRKPVNRP SVRHASHNHP LRVFKARDED EVVCSGCELE LTGQAFKCMK SDCDYFLHKS CFDLPRETNH KSHPNHSLTL LHSPPYGQSY TCDACGEYGS
101: GFTYNCSECQ YDVHVGCAFI PETVEREDHE HPLTLLYNTP CKGREDGAKF ICDVCEEKMS ENLWVYYCKE CDYGTHVHSC AVYEDHESEK RGGGREEGEA
201: SSAVSRMKSL MKAQDEMAAL QLEARIRNDT NNAILDLWDS PKRRYYY
101: GFTYNCSECQ YDVHVGCAFI PETVEREDHE HPLTLLYNTP CKGREDGAKF ICDVCEEKMS ENLWVYYCKE CDYGTHVHSC AVYEDHESEK RGGGREEGEA
201: SSAVSRMKSL MKAQDEMAAL QLEARIRNDT NNAILDLWDS PKRRYYY
Arabidopsis Description
At2g44380 [Source:UniProtKB/TrEMBL;Acc:O64872]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.