Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g073850.1.1 | Tomato | cytosol | 35.59 | 75.68 |
| PGSC0003DMT400016180 | Potato | cytosol | 39.83 | 58.02 |
| Solyc01g073880.2.1 | Tomato | cytosol | 29.66 | 36.27 |
| Bra040653.1-P | Field mustard | mitochondrion | 33.9 | 34.48 |
| CDY30468 | Canola | nucleus | 36.02 | 34.41 |
| CDY23431 | Canola | nucleus | 36.02 | 34.41 |
| Bra037654.1-P | Field mustard | nucleus | 36.02 | 34.41 |
| CDY17855 | Canola | nucleus | 34.75 | 33.88 |
| Bra004826.1-P | Field mustard | nucleus | 34.75 | 33.88 |
| AT2G28270.1 | Thale cress | nucleus | 35.59 | 33.87 |
| AT5G40590.1 | Thale cress | nucleus | 33.05 | 33.33 |
| AT2G44380.1 | Thale cress | mitochondrion, nucleus | 34.32 | 32.79 |
| Bra037655.1-P | Field mustard | nucleus | 33.9 | 32.79 |
| CDY23430 | Canola | nucleus | 34.32 | 32.66 |
| CDX67465 | Canola | cytosol | 32.2 | 32.62 |
| Bra037653.1-P | Field mustard | mitochondrion, nucleus | 35.17 | 32.55 |
| CDX95602 | Canola | nucleus | 33.05 | 32.23 |
| CDY67171 | Canola | cytosol | 31.78 | 32.19 |
| Bra004828.1-P | Field mustard | nucleus | 34.32 | 32.02 |
| AT2G44370.1 | Thale cress | mitochondrion | 33.9 | 32.0 |
| CDY30467 | Canola | nucleus | 33.05 | 31.97 |
| CDX83428 | Canola | nucleus | 32.63 | 31.95 |
| Bra000352.1-P | Field mustard | nucleus | 32.63 | 31.82 |
| Bra028465.1-P | Field mustard | cytosol | 31.36 | 31.76 |
| AT5G43520.1 | Thale cress | mitochondrion, nucleus | 33.05 | 31.2 |
| AT2G17740.1 | Thale cress | cytosol, mitochondrion, nucleus | 32.63 | 31.05 |
| CDY23432 | Canola | mitochondrion, nucleus | 24.58 | 30.69 |
| CDY71677 | Canola | mitochondrion, nucleus | 24.58 | 30.69 |
| CDY30469 | Canola | mitochondrion, nucleus | 24.58 | 29.74 |
| AT2G44390.1 | Thale cress | mitochondrion | 25.0 | 28.23 |
| CDY22774 | Canola | mitochondrion | 19.92 | 27.17 |
| CDY17853 | Canola | mitochondrion, nucleus, plastid | 19.07 | 24.59 |
| Solyc01g073820.2.1 | Tomato | cytosol, extracellular, nucleus | 26.27 | 23.94 |
| CDX79762 | Canola | nucleus, plastid | 20.76 | 23.9 |
| Solyc01g073810.2.1 | Tomato | nucleus | 25.0 | 23.69 |
| Solyc01g073800.2.1 | Tomato | nucleus | 23.31 | 22.18 |
| Solyc12g038680.1.1 | Tomato | nucleus | 19.07 | 20.83 |
| Solyc01g073830.1.1 | Tomato | cytosol, nucleus, peroxisome | 26.27 | 20.0 |
| CDY42552 | Canola | mitochondrion | 18.22 | 18.94 |
| Solyc06g072460.1.1 | Tomato | cytosol | 27.12 | 17.3 |
| Solyc01g073780.2.1 | Tomato | nucleus | 28.39 | 16.88 |
| Solyc03g097960.1.1 | Tomato | cytosol | 25.0 | 16.71 |
| Solyc01g073890.2.1 | Tomato | cytosol | 24.58 | 15.22 |
| Solyc01g073840.1.1 | Tomato | nucleus | 27.97 | 14.38 |
| Solyc02g068680.1.1 | Tomato | nucleus | 24.58 | 12.58 |
| Solyc08g014370.1.1 | Tomato | nucleus, plasma membrane, plastid | 23.31 | 10.32 |
Protein Annotations
| EnsemblPlants:Solyc01g073860.2.1 | EnsemblPlantsGene:Solyc01g073860.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004791 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0098869 |
| InterPro:DC1 | PANTHER:PTHR13871 | PANTHER:PTHR13871:SF60 | PFAM:PF03107 | SEG:seg | SUPFAM:SSF57889 |
| UniParc:UPI000276193C | UniProt:K4AXD1 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr1:-:81193425..81194192
Molecular Weight (calculated)
27209.2 Da
IEP (calculated)
5.705
GRAVY (calculated)
-0.513
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MKHFSHPHAL AIFEVQESNE IICSGCENKL CGTTNYKCTK SNCEFTLHKS CFELPRKILH NSHRDHPLTL YPTLPERDCM YFGCNACGEE PKSFVYECLE
101: CNFSLHAKCV TSVAENITRE DHQHSLILQY EWPFPIEDCV NIFCKVCDGL CNDSNWLYYC TECKLGTHLQ CATIKREDGS SLENEETDEE MTNEQKLTMA
201: TIKAQGQQAR LTFQAQMAYM NAQTITNMWR SSHPPY
101: CNFSLHAKCV TSVAENITRE DHQHSLILQY EWPFPIEDCV NIFCKVCDGL CNDSNWLYYC TECKLGTHLQ CATIKREDGS SLENEETDEE MTNEQKLTMA
201: TIKAQGQQAR LTFQAQMAYM NAQTITNMWR SSHPPY
001: MASRKPVNRP SVRHASHNHP LRVFKARDED EVVCSGCELE LTGQAFKCMK SDCDYFLHKS CFDLPRETNH KSHPNHSLTL LHSPPYGQSY TCDACGEYGS
101: GFTYNCSECQ YDVHVGCAFI PETVEREDHE HPLTLLYNTP CKGREDGAKF ICDVCEEKMS ENLWVYYCKE CDYGTHVHSC AVYEDHESEK RGGGREEGEA
201: SSAVSRMKSL MKAQDEMAAL QLEARIRNDT NNAILDLWDS PKRRYYY
101: GFTYNCSECQ YDVHVGCAFI PETVEREDHE HPLTLLYNTP CKGREDGAKF ICDVCEEKMS ENLWVYYCKE CDYGTHVHSC AVYEDHESEK RGGGREEGEA
201: SSAVSRMKSL MKAQDEMAAL QLEARIRNDT NNAILDLWDS PKRRYYY
Arabidopsis Description
At2g44380 [Source:UniProtKB/TrEMBL;Acc:O64872]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.