Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G44380.1 | Thale cress | mitochondrion, nucleus | 84.69 | 71.66 |
| CDY22774 | Canola | mitochondrion | 58.85 | 71.1 |
| Bra037653.1-P | Field mustard | mitochondrion, nucleus | 77.99 | 63.92 |
| Bra040653.1-P | Field mustard | mitochondrion | 69.38 | 62.5 |
| CDY23432 | Canola | mitochondrion, nucleus | 55.02 | 60.85 |
| CDY71677 | Canola | mitochondrion, nucleus | 55.02 | 60.85 |
| CDY30469 | Canola | mitochondrion, nucleus | 55.5 | 59.49 |
| AT5G43520.1 | Thale cress | mitochondrion, nucleus | 66.99 | 56.0 |
| AT2G28270.1 | Thale cress | nucleus | 62.2 | 52.42 |
| AT5G40590.1 | Thale cress | nucleus | 47.37 | 42.31 |
| AT2G44370.1 | Thale cress | mitochondrion | 50.24 | 42.0 |
| AT2G17740.1 | Thale cress | cytosol, mitochondrion, nucleus | 47.85 | 40.32 |
| Solyc01g073850.1.1 | Tomato | cytosol | 18.66 | 35.14 |
| PGSC0003DMT400016180 | Potato | cytosol | 23.45 | 30.25 |
| Solyc01g073860.2.1 | Tomato | cytosol | 28.23 | 25.0 |
| AT2G44400.1 | Thale cress | mitochondrion, nucleus, peroxisome, vacuole | 16.27 | 23.29 |
| AT2G42060.1 | Thale cress | cytosol | 26.79 | 20.9 |
| AT2G27660.1 | Thale cress | plastid | 22.01 | 6.41 |
Protein Annotations
| MapMan:35.2 | EntrezGene:819046 | ProteinID:AAC16106.1 | ProteinID:AEC10415.1 | ArrayExpress:AT2G44390 | EnsemblPlantsGene:AT2G44390 |
| RefSeq:AT2G44390 | TAIR:AT2G44390 | RefSeq:AT2G44390-TAIR-G | EnsemblPlants:AT2G44390.1 | TAIR:AT2G44390.1 | ncoils:Coil |
| InterPro:DC1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004791 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0098869 | RefSeq:NP_181967.1 |
| UniProt:O64873 | PFAM:PF03107 | PANTHER:PTHR13871 | PANTHER:PTHR13871:SF60 | SUPFAM:SSF57889 | UniParc:UPI000009F5D3 |
Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:O64873]
Coordinates
chr2:-:18325811..18326551
Molecular Weight (calculated)
23675.6 Da
IEP (calculated)
4.594
GRAVY (calculated)
-0.602
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKKPVNRP SVRHASHNHP LRVFKARDED EVVCSGCELD LTGQAFKCIN ETYTCDACGE YGSGFTYNCS ECQYDLHVGC AFIPETVERE DHEHPLTLLY
101: NTPCKGCEDG AMFICNVCEE DMSENLWVYY CKECDYGTHV HSCAVYEDDE PNNRGGEEGE AMSSAVSRMK SLMKAEDELA AVQLEARMKR DANNAILGLY
201: AEPKRRYYW
101: NTPCKGCEDG AMFICNVCEE DMSENLWVYY CKECDYGTHV HSCAVYEDDE PNNRGGEEGE AMSSAVSRMK SLMKAEDELA AVQLEARMKR DANNAILGLY
201: AEPKRRYYW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.