Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040653.1-P | Field mustard | mitochondrion | 95.38 | 71.12 |
| AT2G44390.1 | Thale cress | mitochondrion | 71.1 | 58.85 |
| CDY17853 | Canola | mitochondrion, nucleus, plastid | 54.91 | 51.91 |
| AT2G44380.1 | Thale cress | mitochondrion, nucleus | 72.25 | 50.61 |
| CDY71677 | Canola | mitochondrion, nucleus | 54.34 | 49.74 |
| CDY23432 | Canola | mitochondrion, nucleus | 54.34 | 49.74 |
| CDY30469 | Canola | mitochondrion, nucleus | 54.91 | 48.72 |
| CDX79762 | Canola | nucleus, plastid | 53.76 | 45.37 |
| CDX95602 | Canola | nucleus | 56.07 | 40.08 |
| CDY23431 | Canola | nucleus | 57.23 | 40.08 |
| CDY30468 | Canola | nucleus | 57.23 | 40.08 |
| CDX67465 | Canola | cytosol | 53.76 | 39.91 |
| CDY67171 | Canola | cytosol | 53.18 | 39.48 |
| CDX83428 | Canola | nucleus | 54.91 | 39.42 |
| CDY17855 | Canola | nucleus | 53.18 | 38.02 |
| CDY30467 | Canola | nucleus | 52.02 | 36.89 |
| CDY23430 | Canola | nucleus | 52.6 | 36.69 |
| Solyc01g073850.1.1 | Tomato | cytosol | 20.23 | 31.53 |
| PGSC0003DMT400016180 | Potato | cytosol | 26.01 | 27.78 |
| CDY71678 | Canola | plastid | 16.18 | 20.74 |
| Solyc01g073860.2.1 | Tomato | cytosol | 27.17 | 19.92 |
| CDY42552 | Canola | mitochondrion | 24.28 | 18.5 |
| CDY22552 | Canola | cytosol | 24.28 | 15.44 |
| CDY35387 | Canola | cytosol | 23.12 | 14.71 |
| CDY30470 | Canola | cytosol, plastid | 25.43 | 10.78 |
| CDY04505 | Canola | plastid | 23.7 | 6.16 |
| CDX71437 | Canola | plastid | 23.12 | 6.04 |
Protein Annotations
| EnsemblPlants:CDY22774 | EnsemblPlantsGene:GSBRNA2T00021101001 | GO:A0A078GBQ0 | InterPro:DC1 | PANTHER:PTHR13871 | PANTHER:PTHR13871:SF60 |
| PFAM:PF03107 | ProteinID:CDY22774 | ProteinID:CDY22774.1 | SEG:seg | SUPFAM:SSF57889 | UniParc:UPI0004EE7AA0 |
| UniProt:A0A078GBQ0 | MapMan:35.2 | : | : | : | : |
Description
BnaA08g06040DBnaA08g06040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GBQ0]
Coordinates
chrLK032135:+:557785..558483
Molecular Weight (calculated)
19751.1 Da
IEP (calculated)
5.839
GRAVY (calculated)
-0.696
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKKPVNRP SVRHPSHNHP LRLSSVRRTS YECDACGEYG SGFTYNCSVC KYDVHVGCAF IPETVDREDH KHPLTLLYKI PCEDGKIYVC DVCEEEVSEN
101: LWTYYCKECD YGTHVHSCAL DEDYEGEEEE NRESSSAASR MKSLMKAQDE MAAMKLESRM KKAANNAIIY SIR
101: LWTYYCKECD YGTHVHSCAL DEDYEGEEEE NRESSSAASR MKSLMKAQDE MAAMKLESRM KKAANNAIIY SIR
001: MGSGKTNRPS VRHPSHNHPL RVFNSKEEDE IICSGCEHDL IGQAFKCTKS ECDYFLHKSC FDLPGEIHHK SHTNHPLTLL HSPPNGLSTY TCDACGEYGS
101: AFTYHCSECK YHVHVGCAFV PENVKREDHE HPLTLLYNTP CKGRKDGVVF ICDVCEVDVS ENLWVYYCKE CDYGTHVHSC TTNEDNGPKK GGEEEGESSS
201: LSTSRIKSLM EAEKEMREMA IIHQLQLDAL DAAGSYVGSW EPRRKDYW
101: AFTYHCSECK YHVHVGCAFV PENVKREDHE HPLTLLYNTP CKGRKDGVVF ICDVCEVDVS ENLWVYYCKE CDYGTHVHSC TTNEDNGPKK GGEEEGESSS
201: LSTSRIKSLM EAEKEMREMA IIHQLQLDAL DAAGSYVGSW EPRRKDYW
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9SL28]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.