Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04505 | Canola | plastid | 62.39 | 62.01 |
| AT2G27660.1 | Thale cress | plastid | 47.43 | 43.73 |
| CDY71678 | Canola | plastid | 8.31 | 40.74 |
| Solyc06g072460.1.1 | Tomato | cytosol | 17.22 | 30.81 |
| VIT_08s0007g06630.t01 | Wine grape | cytosol | 12.24 | 29.56 |
| PGSC0003DMT400069576 | Potato | cytosol | 16.47 | 29.46 |
| Solyc03g097960.1.1 | Tomato | cytosol | 15.56 | 29.18 |
| PGSC0003DMT400083994 | Potato | nucleus | 15.56 | 29.18 |
| CDY35387 | Canola | cytosol | 11.18 | 27.21 |
| CDY22552 | Canola | cytosol | 10.73 | 26.1 |
| CDX83428 | Canola | nucleus | 9.37 | 25.73 |
| CDX95602 | Canola | nucleus | 9.21 | 25.21 |
| CDY23431 | Canola | nucleus | 9.37 | 25.1 |
| CDY30468 | Canola | nucleus | 9.37 | 25.1 |
| CDY30470 | Canola | cytosol, plastid | 14.95 | 24.26 |
| CDY17855 | Canola | nucleus | 8.76 | 23.97 |
| CDX67465 | Canola | cytosol | 8.16 | 23.18 |
| CDY67171 | Canola | cytosol | 8.16 | 23.18 |
| CDY22774 | Canola | mitochondrion | 6.04 | 23.12 |
| CDY30469 | Canola | mitochondrion, nucleus | 6.8 | 23.08 |
| CDY23430 | Canola | nucleus | 8.61 | 22.98 |
| CDY23432 | Canola | mitochondrion, nucleus | 6.34 | 22.22 |
| CDY30467 | Canola | nucleus | 8.16 | 22.13 |
| CDY71677 | Canola | mitochondrion, nucleus | 6.19 | 21.69 |
| CDY17853 | Canola | mitochondrion, nucleus, plastid | 4.53 | 16.39 |
| CDX79762 | Canola | nucleus, plastid | 4.98 | 16.1 |
| CDY42552 | Canola | mitochondrion | 5.14 | 14.98 |
Protein Annotations
| EnsemblPlants:CDX71437 | EnsemblPlantsGene:GSBRNA2T00148285001 | GO:A0A078C3E5 | InterPro:DC1 | PANTHER:PTHR13871 | PANTHER:PTHR13871:SF83 |
| PFAM:PF03107 | ProteinID:CDX71437 | ProteinID:CDX71437.1 | SEG:seg | SUPFAM:SSF57889 | UniParc:UPI0004EEDDA8 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC04g16720D
Coordinates
chrLK031793:+:876270..878258
Molecular Weight (calculated)
71202.2 Da
IEP (calculated)
4.963
GRAVY (calculated)
-0.872
Length
662 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKPTAQNNS FINHFSHPHP LQLIPPTSSP PCSACKLTGG NGRVYSCRPC NFCLHESCSK MKQVITHPSH PSHTLTLLVA PVYDGGYFNC DGCGVNGTGF
101: SYQCSLCDFD IHALCAYKPL SIVHNSHPQH TLKLAFHSPY GANKGFSCDI CLKIGKNQWL YRCIPCEFDA HVDCINAHHP HLLQHSSSAP TPLGHHAGHP
201: NNRPRPGQMN RPNRPANNPT RPNRPVGNPN RPIGQNAAVY GPRRQNNNLG CNGPIGPITQ SFDQGSMEGS VFDDSAVNEE FDGEVDVEID YEANGYEGTE
301: DGEAYDEEQD VDGNGLEIVA YGDANDVAYS ESEFGGSSDA RSQSNELSDQ ADLYPLSVRT NRGPGGGRKQ HSSPNSPAPA RSKNIGRNGR GGGRLQGSKN
401: PIENPRGPQT KRLQNVRNNA IRAGGPGGFN RPRDLAAFNG PSGGPSNVID NGGNNDSYNE VDGNEMYAGE YGATYGDEGD CDFEAGGDFV DDGCDQAYDE
501: DDFECYTDIT GGSESMYNED ESYETMDDSQ YNDEPNNQFL SMVEPGGGPG MNNQNQYGQT DRPRRMGRYG RGGTTNMNRY GNVNQGTNST QTRTMGRSVQ
601: RRPNGGQYRA NGNTMMNSMV QGLCQGLAMN MLAGDGSDVN SGAGDSGGSS IFGGLLGGES EF
101: SYQCSLCDFD IHALCAYKPL SIVHNSHPQH TLKLAFHSPY GANKGFSCDI CLKIGKNQWL YRCIPCEFDA HVDCINAHHP HLLQHSSSAP TPLGHHAGHP
201: NNRPRPGQMN RPNRPANNPT RPNRPVGNPN RPIGQNAAVY GPRRQNNNLG CNGPIGPITQ SFDQGSMEGS VFDDSAVNEE FDGEVDVEID YEANGYEGTE
301: DGEAYDEEQD VDGNGLEIVA YGDANDVAYS ESEFGGSSDA RSQSNELSDQ ADLYPLSVRT NRGPGGGRKQ HSSPNSPAPA RSKNIGRNGR GGGRLQGSKN
401: PIENPRGPQT KRLQNVRNNA IRAGGPGGFN RPRDLAAFNG PSGGPSNVID NGGNNDSYNE VDGNEMYAGE YGATYGDEGD CDFEAGGDFV DDGCDQAYDE
501: DDFECYTDIT GGSESMYNED ESYETMDDSQ YNDEPNNQFL SMVEPGGGPG MNNQNQYGQT DRPRRMGRYG RGGTTNMNRY GNVNQGTNST QTRTMGRSVQ
601: RRPNGGQYRA NGNTMMNSMV QGLCQGLAMN MLAGDGSDVN SGAGDSGGSS IFGGLLGGES EF
001: MGKPTTQNNS FINHFSHPHR LQLTPATSSP PCSACKLTGG NGRVYSCRPC NFSLHESCSK MKQVITHPSH PSHTLSLLVA PVYDGGYFNC DGCGIHGTGF
101: SYQCSVCDFD IHALCAYKPL SIIHKSHPQH NLKLAFQSPY GANKGFSCDI CRKIGKNQWL YRCIPCEFDA HVGCITGPNP HLLQHSTSAP NPHTHHAGHP
201: QHQNSLPVPN QGSNRVRPMP MTRPNRTINP NRPIAQNAAV NGPRRQNNNL GYNAQVGPNG PNELTGQGSM DGSGYNGSAS ATNKEFDVDV DVDVDVDVDV
301: DVDVEVEYEG DVYVEEANDE GEDVDGNDEG EDVDGNGLEI VACVDNLSVA YSESDFGSSS DARSQCNDLS DADLYPLSLD NTQGPRPVRM NQGSGGGRKK
401: NTNQNGQASR SKKIVGNGPR GGLQGSNSPI QSPRGPQTRR VQNVRNNPTR GRGGAVSVRV NRPRDPSAFI APQGFNGPSG GPSNAIDSGA NNDNYNEVEG
501: TDVYVGEDNV GYEESYGGGD GDCDFEVGGD FGDEGYDQSY DDNYGENDFE SYSDITGGSE SMYEDGESYG TMNDSQYSGF NEEPNNQYAP MVGPVGGPGM
601: NNQNQYGQNG RPRNVGMYGR GGTNMNRYGN VNQGANRMQP RTMGGRPLQY RPNGRPNMAN GGVPNGPLGL GTPMLMNTMV QGLCQSFGMN MLIGGGGDAN
701: GGAGDGGGGG FFGGETEF
101: SYQCSVCDFD IHALCAYKPL SIIHKSHPQH NLKLAFQSPY GANKGFSCDI CRKIGKNQWL YRCIPCEFDA HVGCITGPNP HLLQHSTSAP NPHTHHAGHP
201: QHQNSLPVPN QGSNRVRPMP MTRPNRTINP NRPIAQNAAV NGPRRQNNNL GYNAQVGPNG PNELTGQGSM DGSGYNGSAS ATNKEFDVDV DVDVDVDVDV
301: DVDVEVEYEG DVYVEEANDE GEDVDGNDEG EDVDGNGLEI VACVDNLSVA YSESDFGSSS DARSQCNDLS DADLYPLSLD NTQGPRPVRM NQGSGGGRKK
401: NTNQNGQASR SKKIVGNGPR GGLQGSNSPI QSPRGPQTRR VQNVRNNPTR GRGGAVSVRV NRPRDPSAFI APQGFNGPSG GPSNAIDSGA NNDNYNEVEG
501: TDVYVGEDNV GYEESYGGGD GDCDFEVGGD FGDEGYDQSY DDNYGENDFE SYSDITGGSE SMYEDGESYG TMNDSQYSGF NEEPNNQYAP MVGPVGGPGM
601: NNQNQYGQNG RPRNVGMYGR GGTNMNRYGN VNQGANRMQP RTMGGRPLQY RPNGRPNMAN GGVPNGPLGL GTPMLMNTMV QGLCQSFGMN MLIGGGGDAN
701: GGAGDGGGGG FFGGETEF
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZUW8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.