Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- peroxisome 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G44400.1 | Thale cress | mitochondrion, nucleus, peroxisome, vacuole | 58.52 | 54.11 |
| Bra037652.1-P | Field mustard | cytosol, plastid | 90.37 | 29.98 |
| CDY30470 | Canola | cytosol, plastid | 88.89 | 29.41 |
| CDY23432 | Canola | mitochondrion, nucleus | 27.41 | 19.58 |
| CDY30469 | Canola | mitochondrion, nucleus | 28.15 | 19.49 |
| CDY71677 | Canola | mitochondrion, nucleus | 26.67 | 19.05 |
| CDX95602 | Canola | nucleus | 34.07 | 19.01 |
| CDX83428 | Canola | nucleus | 33.33 | 18.67 |
| CDY17855 | Canola | nucleus | 33.33 | 18.59 |
| CDY23431 | Canola | nucleus | 33.33 | 18.22 |
| CDY30468 | Canola | nucleus | 33.33 | 18.22 |
| CDY30467 | Canola | nucleus | 32.59 | 18.03 |
| CDY23430 | Canola | nucleus | 32.59 | 17.74 |
| CDY67171 | Canola | cytosol | 29.63 | 17.17 |
| Solyc01g073890.2.1 | Tomato | cytosol | 47.41 | 16.8 |
| CDX67465 | Canola | cytosol | 28.89 | 16.74 |
| CDY22774 | Canola | mitochondrion | 20.74 | 16.18 |
| PGSC0003DMT400016143 | Potato | nucleus | 45.19 | 16.05 |
| CDY22552 | Canola | cytosol | 31.11 | 15.44 |
| VIT_08s0007g06630.t01 | Wine grape | cytosol | 31.11 | 15.33 |
| CDY35387 | Canola | cytosol | 30.37 | 15.07 |
| CDY42552 | Canola | mitochondrion | 20.74 | 12.33 |
| CDX79762 | Canola | nucleus, plastid | 17.04 | 11.22 |
| CDY17853 | Canola | mitochondrion, nucleus, plastid | 14.81 | 10.93 |
| CDX71437 | Canola | plastid | 40.74 | 8.31 |
| CDY04505 | Canola | plastid | 40.74 | 8.26 |
Protein Annotations
| EnsemblPlants:CDY71678 | EnsemblPlantsGene:GSBRNA2T00018074001 | GO:A0A078JVR9 | InterPro:DC1 | PANTHER:PTHR13871 | PANTHER:PTHR13871:SF86 |
| PFAM:PF03107 | PFscan:PS51257 | ProteinID:CDY71678 | ProteinID:CDY71678.1 | SEG:seg | SUPFAM:SSF57889 |
| UniParc:UPI0004EF2D7F | UniProt:A0A078JVR9 | MapMan:35.2 | : | : | : |
Description
BnaAnng38420DBnaAnng38420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JVR9]
Coordinates
chrLK046904:+:1566..2074
Molecular Weight (calculated)
15045.2 Da
IEP (calculated)
9.065
GRAVY (calculated)
-0.407
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRPKPEDSI RHFSHPHPLF NSSLNPQANS SSSSCVVCKL KLLNLPSYTC KPCNFHIHLK CSELPQKIRH PFDKTHLLSL ISSPKYQGGL FRCDACGKNG
101: DGFAYHCGDC GIDLHTVCAN MPSRLPLQRV SRTRV
101: DGFAYHCGDC GIDLHTVCAN MPSRLPLQRV SRTRV
001: MICKLKLLSL PSYSSKPCNF YIHLKCSELP QKIRHPFDRN HLLSLISSPK YQEGRFRCNA CGKDGDRLAY HCGDCGIDLH TVCANMPSRV THQSHPHHQL
101: SLTFSMPPGG PGSAAASSFQ CCVCRGLGSN SWLYSCGECS GFDAHL
101: SLTFSMPPGG PGSAAASSFQ CCVCRGLGSN SWLYSCGECS GFDAHL
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:O64874]
SUBAcon: [mitochondrion,peroxisome,nucleus,vacuole]
SUBAcon: [mitochondrion,peroxisome,nucleus,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.