Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71677 | Canola | mitochondrion, nucleus | 28.19 | 33.86 |
| CDY30469 | Canola | mitochondrion, nucleus | 28.19 | 32.82 |
| CDY23432 | Canola | mitochondrion, nucleus | 27.31 | 32.8 |
| CDX83428 | Canola | nucleus | 32.6 | 30.71 |
| CDX95602 | Canola | nucleus | 32.16 | 30.17 |
| CDY23430 | Canola | nucleus | 31.28 | 28.63 |
| CDY17855 | Canola | nucleus | 29.96 | 28.1 |
| CDY30468 | Canola | nucleus | 29.96 | 27.53 |
| CDY30467 | Canola | nucleus | 29.52 | 27.46 |
| CDY23431 | Canola | nucleus | 29.52 | 27.13 |
| CDX67465 | Canola | cytosol | 27.31 | 26.61 |
| CDY67171 | Canola | cytosol | 26.87 | 26.18 |
| CDY22774 | Canola | mitochondrion | 18.5 | 24.28 |
| CDY71678 | Canola | plastid | 12.33 | 20.74 |
| Solyc01g073860.2.1 | Tomato | cytosol | 18.94 | 18.22 |
| CDY17853 | Canola | mitochondrion, nucleus, plastid | 12.78 | 15.85 |
| CDX79762 | Canola | nucleus, plastid | 14.1 | 15.61 |
| Solyc01g073850.1.1 | Tomato | cytosol | 7.05 | 14.41 |
| CDY22552 | Canola | cytosol | 16.74 | 13.97 |
| CDY35387 | Canola | cytosol | 16.74 | 13.97 |
| PGSC0003DMT400016180 | Potato | cytosol | 7.93 | 11.11 |
| CDY30470 | Canola | cytosol, plastid | 14.98 | 8.33 |
| CDX71437 | Canola | plastid | 14.98 | 5.14 |
| CDY04505 | Canola | plastid | 14.98 | 5.11 |
Protein Annotations
| EnsemblPlants:CDY42552 | EnsemblPlantsGene:GSBRNA2T00075026001 | InterPro:DC1 | PANTHER:PTHR13871 | PANTHER:PTHR13871:SF60 | PFAM:PF03107 |
| ProteinID:CDY42552 | ProteinID:CDY42552.1 | SEG:seg | SUPFAM:SSF57889 | UniParc:UPI0004EE50E8 | UniProt:A0A078HXK2 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC08g10510DBnaC08g10510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HXK2]
Coordinates
chrLK032528:+:221850..223102
Molecular Weight (calculated)
25664.6 Da
IEP (calculated)
6.162
GRAVY (calculated)
-0.397
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKKPVNRP SVRHPSHNHP LRVFKAQNED EIICSGCELD LTGQAFKCTK DFLRTVDRED HKHPLTLLYK IPCEDGKMYV CDVCEEEVSE NLWTYYCKEC
101: DYGTHVHSCA LDEDYEKEEE ENRESSSAAS RMKSLMKAQD EIAAMKLESP GGGLRWFLYR RRCRLSLLLS LFPSSPLSRL ILPLSSSADI LSIVVSLPSP
201: ASLSGGEVSG AVVRRGCESE VWWLFRG
101: DYGTHVHSCA LDEDYEKEEE ENRESSSAAS RMKSLMKAQD EIAAMKLESP GGGLRWFLYR RRCRLSLLLS LFPSSPLSRL ILPLSSSADI LSIVVSLPSP
201: ASLSGGEVSG AVVRRGCESE VWWLFRG
001: MASKKPVNRP SVRHASHNHP LRVFKARDED EVVCSGCELD LTGQAFKCIN ETYTCDACGE YGSGFTYNCS ECQYDLHVGC AFIPETVERE DHEHPLTLLY
101: NTPCKGCEDG AMFICNVCEE DMSENLWVYY CKECDYGTHV HSCAVYEDDE PNNRGGEEGE AMSSAVSRMK SLMKAEDELA AVQLEARMKR DANNAILGLY
201: AEPKRRYYW
101: NTPCKGCEDG AMFICNVCEE DMSENLWVYY CKECDYGTHV HSCAVYEDDE PNNRGGEEGE AMSSAVSRMK SLMKAEDELA AVQLEARMKR DANNAILGLY
201: AEPKRRYYW
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:O64873]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.