Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g073850.1.1 | Tomato | cytosol | 43.21 | 63.06 |
| Solyc01g073860.2.1 | Tomato | cytosol | 58.02 | 39.83 |
| CDY22774 | Canola | mitochondrion | 27.78 | 26.01 |
| CDY17853 | Canola | mitochondrion, nucleus, plastid | 28.4 | 25.14 |
| AT2G44390.1 | Thale cress | mitochondrion | 30.25 | 23.45 |
| CDX79762 | Canola | nucleus, plastid | 27.78 | 21.95 |
| CDY23431 | Canola | nucleus | 30.86 | 20.24 |
| CDY71677 | Canola | mitochondrion, nucleus | 23.46 | 20.11 |
| CDY23432 | Canola | mitochondrion, nucleus | 23.46 | 20.11 |
| CDY30469 | Canola | mitochondrion, nucleus | 24.07 | 20.0 |
| CDY17855 | Canola | nucleus | 29.63 | 19.83 |
| Bra004826.1-P | Field mustard | nucleus | 29.63 | 19.83 |
| CDX67465 | Canola | cytosol | 28.4 | 19.74 |
| AT5G40590.1 | Thale cress | nucleus | 28.4 | 19.66 |
| AT2G44380.1 | Thale cress | mitochondrion, nucleus | 29.63 | 19.43 |
| Bra040653.1-P | Field mustard | mitochondrion | 27.78 | 19.4 |
| Bra004828.1-P | Field mustard | nucleus | 30.25 | 19.37 |
| Bra028465.1-P | Field mustard | cytosol | 27.78 | 19.31 |
| CDY67171 | Canola | cytosol | 27.78 | 19.31 |
| AT5G43520.1 | Thale cress | mitochondrion, nucleus | 29.63 | 19.2 |
| Bra037655.1-P | Field mustard | nucleus | 28.4 | 18.85 |
| Bra037654.1-P | Field mustard | nucleus | 28.4 | 18.62 |
| CDY30468 | Canola | nucleus | 28.4 | 18.62 |
| CDY30467 | Canola | nucleus | 27.78 | 18.44 |
| Bra037653.1-P | Field mustard | mitochondrion, nucleus | 29.01 | 18.43 |
| CDY23430 | Canola | nucleus | 27.78 | 18.15 |
| AT2G28270.1 | Thale cress | nucleus | 27.16 | 17.74 |
| CDX95602 | Canola | nucleus | 25.31 | 16.94 |
| AT2G44370.1 | Thale cress | mitochondrion | 25.93 | 16.8 |
| CDX83428 | Canola | nucleus | 24.69 | 16.6 |
| AT2G17740.1 | Thale cress | cytosol, mitochondrion, nucleus | 25.31 | 16.53 |
| Bra000352.1-P | Field mustard | nucleus | 24.69 | 16.53 |
| PGSC0003DMT400093177 | Potato | cytosol | 12.96 | 15.56 |
| PGSC0003DMT400016174 | Potato | nucleus | 20.99 | 15.38 |
| PGSC0003DMT400074528 | Potato | nucleus | 22.84 | 15.1 |
| PGSC0003DMT400074529 | Potato | cytosol | 22.22 | 14.94 |
| PGSC0003DMT400016177 | Potato | nucleus | 21.6 | 14.58 |
| PGSC0003DMT400074527 | Potato | cytosol | 20.37 | 13.52 |
| PGSC0003DMT400074530 | Potato | cytosol, mitochondrion, nucleus | 20.99 | 13.18 |
| PGSC0003DMT400074525 | Potato | cytosol | 19.75 | 13.11 |
| PGSC0003DMT400016183 | Potato | nucleus | 22.84 | 12.89 |
| PGSC0003DMT400016178 | Potato | cytosol | 19.75 | 12.7 |
| PGSC0003DMT400074526 | Potato | nucleus | 20.37 | 12.41 |
| PGSC0003DMT400074531 | Potato | nucleus | 19.14 | 11.92 |
| PGSC0003DMT400048642 | Potato | cytosol | 4.32 | 11.67 |
| PGSC0003DMT400074532 | Potato | nucleus | 27.78 | 11.45 |
| PGSC0003DMT400016179 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 27.16 | 11.08 |
| PGSC0003DMT400016188 | Potato | nucleus | 24.07 | 10.68 |
| PGSC0003DMT400069576 | Potato | cytosol | 22.84 | 10.0 |
| PGSC0003DMT400083994 | Potato | nucleus | 21.6 | 9.92 |
| PGSC0003DMT400016143 | Potato | nucleus | 22.22 | 9.47 |
| PGSC0003DMT400016187 | Potato | nucleus | 24.69 | 8.71 |
| PGSC0003DMT400027065 | Potato | nucleus | 24.69 | 8.68 |
| PGSC0003DMT400029742 | Potato | cytosol | 21.6 | 7.94 |
| CDY42552 | Canola | mitochondrion | 11.11 | 7.93 |
| PGSC0003DMT400085165 | Potato | extracellular | 15.43 | 6.83 |
| PGSC0003DMT400094028 | Potato | plasma membrane | 19.14 | 5.78 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400016180 | EnsemblPlantsGene:PGSC0003DMG400006324 | InterPro:DC1 | ncoils:Coil | PANTHER:PTHR13871 | PANTHER:PTHR13871:SF60 |
| PFAM:PF03107 | PGSC:PGSC0003DMG400006324 | SEG:seg | SUPFAM:SSF57889 | UniParc:UPI0002957970 | UniProt:M1A787 |
| MapMan:35.2 | : | : | : | : | : |
Description
DC1 domain containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400006324]
Coordinates
chr1:+:66775041..66775529
Molecular Weight (calculated)
19033.2 Da
IEP (calculated)
4.441
GRAVY (calculated)
-0.701
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MYFGCNACGE EPKSFVYECL KCNFSLHAKC ATSWPETVTR EDHQHSLAIQ YQWPFSSDEY VNIFCEVCCG LCNDSKWLYY CGECKFGTHL KCATVKKEDG
101: SNLENEEEEE EEEEDYENMS DEQKLLMLTI KAQGQQARLN FQTQMAYMNA QTMANMFRHR YY
101: SNLENEEEEE EEEEDYENMS DEQKLLMLTI KAQGQQARLN FQTQMAYMNA QTMANMFRHR YY
001: MASKKPVNRP SVRHASHNHP LRVFKARDED EVVCSGCELD LTGQAFKCIN ETYTCDACGE YGSGFTYNCS ECQYDLHVGC AFIPETVERE DHEHPLTLLY
101: NTPCKGCEDG AMFICNVCEE DMSENLWVYY CKECDYGTHV HSCAVYEDDE PNNRGGEEGE AMSSAVSRMK SLMKAEDELA AVQLEARMKR DANNAILGLY
201: AEPKRRYYW
101: NTPCKGCEDG AMFICNVCEE DMSENLWVYY CKECDYGTHV HSCAVYEDDE PNNRGGEEGE AMSSAVSRMK SLMKAEDELA AVQLEARMKR DANNAILGLY
201: AEPKRRYYW
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:O64873]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.