Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400074529 | Potato | cytosol | 15.03 | 22.82 |
| PGSC0003DMT400016177 | Potato | nucleus | 14.48 | 22.08 |
| PGSC0003DMT400074528 | Potato | nucleus | 14.48 | 21.63 |
| PGSC0003DMT400074525 | Potato | cytosol | 13.93 | 20.9 |
| PGSC0003DMT400016178 | Potato | cytosol | 14.21 | 20.63 |
| PGSC0003DMT400074527 | Potato | cytosol | 13.66 | 20.49 |
| PGSC0003DMT400074531 | Potato | nucleus | 14.21 | 20.0 |
| PGSC0003DMT400074530 | Potato | cytosol, mitochondrion, nucleus | 13.93 | 19.77 |
| PGSC0003DMT400016174 | Potato | nucleus | 11.48 | 19.0 |
| PGSC0003DMT400048642 | Potato | cytosol | 3.01 | 18.33 |
| PGSC0003DMT400074526 | Potato | nucleus | 12.84 | 17.67 |
| PGSC0003DMT400016183 | Potato | nucleus | 12.3 | 15.68 |
| PGSC0003DMT400093177 | Potato | cytosol | 5.74 | 15.56 |
| PGSC0003DMT400016180 | Potato | cytosol | 6.83 | 15.43 |
| PGSC0003DMT400016188 | Potato | nucleus | 12.84 | 12.88 |
| PGSC0003DMT400074532 | Potato | nucleus | 13.11 | 12.21 |
| PGSC0003DMT400083994 | Potato | nucleus | 11.75 | 12.18 |
| PGSC0003DMT400016143 | Potato | nucleus | 12.57 | 12.11 |
| PGSC0003DMT400069576 | Potato | cytosol | 11.48 | 11.35 |
| PGSC0003DMT400016179 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 11.48 | 10.58 |
| PGSC0003DMT400016187 | Potato | nucleus | 12.3 | 9.8 |
| PGSC0003DMT400029742 | Potato | cytosol | 11.48 | 9.52 |
| PGSC0003DMT400094028 | Potato | plasma membrane | 13.11 | 8.96 |
| PGSC0003DMT400027065 | Potato | nucleus | 10.66 | 8.46 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400085165 | EnsemblPlantsGene:PGSC0003DMG400034736 | InterPro:DC1 | PANTHER:PTHR13871 | PANTHER:PTHR13871:SF83 | PFAM:PF03107 |
| PGSC:PGSC0003DMG400034736 | SUPFAM:SSF57889 | UniParc:UPI000295C34E | UniProt:M1D8W3 | MapMan:35.2 | : |
Description
DC1 domain containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400034736]
Coordinates
chr10:+:59008850..59009950
Molecular Weight (calculated)
42224.3 Da
IEP (calculated)
5.883
GRAVY (calculated)
-0.078
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MPARSIVIIT FMRCVVISLE KFTMIFYDHT LILRPFQLSN NNEQFHCRAC GFDDSELSLF QSYYCCDSCN FNLHVECASI PITLNHKKKY PLHLFLSFPI
101: TSEAAALFCS ICAKEVPTSG CWVFYNHDHD YLCHFECAAV TEYATNNDSM SELQTRLQTL VLTNSPPTPP DLSCGDVTHY HALREFVSSW PLRFNLCEFT
201: VFSGYICSDC NYFIDKNCFS IPSKIQHMSH PQHPLKFTRY TDFMHEDLKC TGCDADFKHL GNGRAYYCTQ CKFIINRYCA SAPKSLTLED NVSYELFFSF
301: PFKHGNAEID CNICSDVVVI KDGLFYYNRE CHEALHVICA LDEEAGFDND KMDMLSIQRL QELRII
101: TSEAAALFCS ICAKEVPTSG CWVFYNHDHD YLCHFECAAV TEYATNNDSM SELQTRLQTL VLTNSPPTPP DLSCGDVTHY HALREFVSSW PLRFNLCEFT
201: VFSGYICSDC NYFIDKNCFS IPSKIQHMSH PQHPLKFTRY TDFMHEDLKC TGCDADFKHL GNGRAYYCTQ CKFIINRYCA SAPKSLTLED NVSYELFFSF
301: PFKHGNAEID CNICSDVVVI KDGLFYYNRE CHEALHVICA LDEEAGFDND KMDMLSIQRL QELRII
001: MAARKPSVRH PSHNHPLRSH KAQVEEEIIC SGCDLDLIGA AFKCTKSECD YFLHKSCFEL PRETRHKAHP DHPLILLYSP PYESTYTCDA CGEYGSGFTY
101: NCSICQYDVH VGCVSMPESV EREGHAHPLT LLYRSPYQNG LIFNCDVCQE TVPDNLWSYY CKECDYGTHL HSCAVEEEEA EEEEPKRGGG SARGNTKSGG
201: NKGGRGSAAS ELAAMLEAQR EMEKMQIELH MEMQRAKIAK KARKACLKLI
101: NCSICQYDVH VGCVSMPESV EREGHAHPLT LLYRSPYQNG LIFNCDVCQE TVPDNLWSYY CKECDYGTHL HSCAVEEEEA EEEEPKRGGG SARGNTKSGG
201: NKGGRGSAAS ELAAMLEAQR EMEKMQIELH MEMQRAKIAK KARKACLKLI
Arabidopsis Description
At2g44370 [Source:UniProtKB/TrEMBL;Acc:O64871]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.