Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400048642 | Potato | cytosol | 11.11 | 25.0 |
| PGSC0003DMT400074525 | Potato | cytosol | 23.7 | 13.11 |
| PGSC0003DMT400016180 | Potato | cytosol | 15.56 | 12.96 |
| PGSC0003DMT400074529 | Potato | cytosol | 22.96 | 12.86 |
| PGSC0003DMT400074527 | Potato | cytosol | 22.96 | 12.7 |
| PGSC0003DMT400016174 | Potato | nucleus | 20.74 | 12.67 |
| PGSC0003DMT400016178 | Potato | cytosol | 22.96 | 12.3 |
| PGSC0003DMT400074528 | Potato | nucleus | 22.22 | 12.24 |
| PGSC0003DMT400016177 | Potato | nucleus | 21.48 | 12.08 |
| PGSC0003DMT400074530 | Potato | cytosol, mitochondrion, nucleus | 22.22 | 11.63 |
| PGSC0003DMT400074526 | Potato | nucleus | 22.22 | 11.28 |
| PGSC0003DMT400074531 | Potato | nucleus | 21.48 | 11.15 |
| PGSC0003DMT400016183 | Potato | nucleus | 23.7 | 11.15 |
| PGSC0003DMT400074532 | Potato | nucleus | 24.44 | 8.4 |
| PGSC0003DMT400016188 | Potato | nucleus | 20.74 | 7.67 |
| PGSC0003DMT400016179 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 21.48 | 7.3 |
| PGSC0003DMT400029742 | Potato | cytosol | 23.7 | 7.26 |
| PGSC0003DMT400016143 | Potato | nucleus | 19.26 | 6.84 |
| PGSC0003DMT400016187 | Potato | nucleus | 22.22 | 6.54 |
| PGSC0003DMT400083994 | Potato | nucleus | 17.04 | 6.52 |
| PGSC0003DMT400069576 | Potato | cytosol | 17.04 | 6.22 |
| PGSC0003DMT400085165 | Potato | extracellular | 15.56 | 5.74 |
| PGSC0003DMT400094028 | Potato | plasma membrane | 22.22 | 5.6 |
| PGSC0003DMT400027065 | Potato | nucleus | 17.78 | 5.21 |
| Bra012008.1-P | Field mustard | nucleus | 3.7 | 1.08 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400093177 | EnsemblPlantsGene:PGSC0003DMG400042748 | InterPro:DC1 | PANTHER:PTHR13871 | PANTHER:PTHR13871:SF83 | PFAM:PF03107 |
| PGSC:PGSC0003DMG400042748 | SUPFAM:SSF57889 | UniParc:UPI0002951F3F | UniProt:M1DRE2 | MapMan:35.2 | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400042748]
Coordinates
chr10:+:59012021..59012428
Molecular Weight (calculated)
15452.6 Da
IEP (calculated)
8.322
GRAVY (calculated)
-0.415
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MIRHMSHPQH PLKLTCYLDY QNENVNCLGC QGGFQNGRSR AYYCAPCKLI INHQCAGAPK TLTLADNVSY ELFFEFPFKQ ENAEIKCNIC SKKVVTKDGM
101: LYYSLKRDEA LHVVCALKSE SNNDVTKMDR LSVHR
101: LYYSLKRDEA LHVVCALKSE SNNDVTKMDR LSVHR
001: MEIVEVSPIH KHPLLPITRF SREHCKCNVC GSVGYIYGGY CCNEVGCESM FHKECVESLS EIKHTSHPDH PLKLLISDKA SFCSRCEGRF ENGYICSICD
101: FKLDFRCAKG PAPLLILEKS NLHEHLLEFF VGWHSWKGHR ECKACGGAGF RGYRWYGCYQ CDTLFHGECA EFFPEAKHTS HPQHTLKHIT SEEAPDYADN
201: KCLLCEEEFD QQHPKIHHCD VCNFTICRAC MKNAPPVRIE SLTTHEHQLH LVPRRIDFTC NACGTLGDRS PYFCLQCNFM IHRQCIDLPR VININRHDHR
301: ISYTRRLGHG EWKCKVCRKK VDGFYGAYTC LKCPSFVVHS LCATRNDVWD MIELEGMQEE EEIAPYEMID ANTIKHFSHD HNLQINNDGH GRIQPENIVC
401: EACVFQILSE PFYSCNQCSF ILHEKCANHP RKKRHVCNNT SFILFTDSCN KANASCGLCK QHFTGFRYES GPYVTIDVRC AAILDTIEHG SHQHPLYYYT
501: TFDWKPCSRC REEGAVLFRC DECDYILDGN CALFPKKVMR NRYDDHLLFL SFGDKNVSGD YWCEACETKV NPKEWFYTCN DCGTILHISC VVGDFSYIMP
601: GSHITTWRAN VVSNTSICRP VCYMCNSRCK LPSVLKLSDT KVDVYLCSFK CAYFIRK
101: FKLDFRCAKG PAPLLILEKS NLHEHLLEFF VGWHSWKGHR ECKACGGAGF RGYRWYGCYQ CDTLFHGECA EFFPEAKHTS HPQHTLKHIT SEEAPDYADN
201: KCLLCEEEFD QQHPKIHHCD VCNFTICRAC MKNAPPVRIE SLTTHEHQLH LVPRRIDFTC NACGTLGDRS PYFCLQCNFM IHRQCIDLPR VININRHDHR
301: ISYTRRLGHG EWKCKVCRKK VDGFYGAYTC LKCPSFVVHS LCATRNDVWD MIELEGMQEE EEIAPYEMID ANTIKHFSHD HNLQINNDGH GRIQPENIVC
401: EACVFQILSE PFYSCNQCSF ILHEKCANHP RKKRHVCNNT SFILFTDSCN KANASCGLCK QHFTGFRYES GPYVTIDVRC AAILDTIEHG SHQHPLYYYT
501: TFDWKPCSRC REEGAVLFRC DECDYILDGN CALFPKKVMR NRYDDHLLFL SFGDKNVSGD YWCEACETKV NPKEWFYTCN DCGTILHISC VVGDFSYIMP
601: GSHITTWRAN VVSNTSICRP VCYMCNSRCK LPSVLKLSDT KVDVYLCSFK CAYFIRK
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9SJ91]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.