Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17855 | Canola | nucleus | 97.93 | 97.93 |
| AT2G44370.1 | Thale cress | mitochondrion | 76.03 | 73.6 |
| Bra037655.1-P | Field mustard | nucleus | 69.83 | 69.26 |
| Bra028465.1-P | Field mustard | cytosol | 61.57 | 63.95 |
| AT2G17740.1 | Thale cress | cytosol, mitochondrion, nucleus | 64.46 | 62.9 |
| Bra040653.1-P | Field mustard | mitochondrion | 56.61 | 59.05 |
| Bra000352.1-P | Field mustard | nucleus | 52.89 | 52.89 |
| Bra037654.1-P | Field mustard | nucleus | 52.07 | 51.01 |
| Bra037653.1-P | Field mustard | mitochondrion, nucleus | 53.31 | 50.59 |
| Bra004828.1-P | Field mustard | nucleus | 50.41 | 48.22 |
| Solyc01g073860.2.1 | Tomato | cytosol | 33.88 | 34.75 |
| Solyc01g073850.1.1 | Tomato | cytosol | 14.88 | 32.43 |
| PGSC0003DMT400016180 | Potato | cytosol | 19.83 | 29.63 |
| Bra000252.1-P | Field mustard | cytosol | 28.1 | 25.0 |
| Bra037652.1-P | Field mustard | cytosol, plastid | 26.86 | 15.97 |
| Bra012008.1-P | Field mustard | nucleus | 3.72 | 1.95 |
Protein Annotations
| EnsemblPlants:Bra004826.1 | EnsemblPlants:Bra004826.1-P | EnsemblPlantsGene:Bra004826 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009561 |
| GO:GO:0055046 | InterPro:DC1 | ncoils:Coil | PANTHER:PTHR13871 | PANTHER:PTHR13871:SF60 | PFAM:PF03107 |
| SEG:seg | SUPFAM:SSF57889 | UniParc:UPI0002547D28 | UniProt:M4CKU0 | MapMan:35.2 | : |
Description
AT2G44370 (E=3e-099) | DC1 domain-containing protein
Coordinates
chrA05:-:1987355..1988083
Molecular Weight (calculated)
27061.0 Da
IEP (calculated)
7.317
GRAVY (calculated)
-0.613
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSKPAVRH PSHNHPLRSH KAQAEEEIIC SGCDLDLIGA AFKCTKSECD YFLHKSCFEL PRENRHKSHP EHPLTLLYSP TYESSAFACD ACGEYGSGFS
101: YNCSICKYDV HVGCVSMPET VEREGHAHPL TLLYRSPYQK GLIFNCDECH DTVPDNLWSY YCKKCDYGTH LHSCAVEEEP KRGGGGSGNT SRNNGGRSSA
201: ASDLSAMLKA QREMERMQIE LDMAMQSAKI AKKSRKHMLK MI
101: YNCSICKYDV HVGCVSMPET VEREGHAHPL TLLYRSPYQK GLIFNCDECH DTVPDNLWSY YCKKCDYGTH LHSCAVEEEP KRGGGGSGNT SRNNGGRSSA
201: ASDLSAMLKA QREMERMQIE LDMAMQSAKI AKKSRKHMLK MI
001: MAARKPSVRH PSHNHPLRSH KAQVEEEIIC SGCDLDLIGA AFKCTKSECD YFLHKSCFEL PRETRHKAHP DHPLILLYSP PYESTYTCDA CGEYGSGFTY
101: NCSICQYDVH VGCVSMPESV EREGHAHPLT LLYRSPYQNG LIFNCDVCQE TVPDNLWSYY CKECDYGTHL HSCAVEEEEA EEEEPKRGGG SARGNTKSGG
201: NKGGRGSAAS ELAAMLEAQR EMEKMQIELH MEMQRAKIAK KARKACLKLI
101: NCSICQYDVH VGCVSMPESV EREGHAHPLT LLYRSPYQNG LIFNCDVCQE TVPDNLWSYY CKECDYGTHL HSCAVEEEEA EEEEPKRGGG SARGNTKSGG
201: NKGGRGSAAS ELAAMLEAQR EMEKMQIELH MEMQRAKIAK KARKACLKLI
Arabidopsis Description
At2g44370 [Source:UniProtKB/TrEMBL;Acc:O64871]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.