Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30467 | Canola | nucleus | 82.8 | 84.84 |
| CDY23430 | Canola | nucleus | 80.0 | 80.65 |
| Bra037655.1-P | Field mustard | nucleus | 76.0 | 77.87 |
| Bra004826.1-P | Field mustard | nucleus | 73.6 | 76.03 |
| CDY17855 | Canola | nucleus | 73.2 | 75.62 |
| AT2G17740.1 | Thale cress | cytosol, mitochondrion, nucleus | 72.4 | 72.98 |
| AT5G40590.1 | Thale cress | nucleus | 66.0 | 70.51 |
| AT2G44380.1 | Thale cress | mitochondrion, nucleus | 55.6 | 56.28 |
| AT5G43520.1 | Thale cress | mitochondrion, nucleus | 52.8 | 52.8 |
| AT2G28270.1 | Thale cress | nucleus | 50.8 | 51.21 |
| AT2G44390.1 | Thale cress | mitochondrion | 42.0 | 50.24 |
| Solyc01g073860.2.1 | Tomato | cytosol | 32.0 | 33.9 |
| Solyc01g073850.1.1 | Tomato | cytosol | 14.8 | 33.33 |
| AT2G44400.1 | Thale cress | mitochondrion, nucleus, peroxisome, vacuole | 18.4 | 31.51 |
| PGSC0003DMT400016180 | Potato | cytosol | 16.8 | 25.93 |
| AT2G42060.1 | Thale cress | cytosol | 26.4 | 24.63 |
| AT2G27660.1 | Thale cress | plastid | 22.8 | 7.94 |
Protein Annotations
| MapMan:35.2 | EntrezGene:819044 | ProteinID:AAC16104.1 | ProteinID:AEC10413.1 | ArrayExpress:AT2G44370 | EnsemblPlantsGene:AT2G44370 |
| RefSeq:AT2G44370 | TAIR:AT2G44370 | RefSeq:AT2G44370-TAIR-G | EnsemblPlants:AT2G44370.1 | TAIR:AT2G44370.1 | Unigene:At.36770 |
| EMBL:BT011214 | EMBL:BT012145 | ncoils:Coil | InterPro:DC1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004791 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0098869 | RefSeq:NP_181965.1 | UniProt:O64871 | PFAM:PF03107 | PO:PO:0000293 |
| PO:PO:0009005 | PO:PO:0020100 | PANTHER:PTHR13871 | PANTHER:PTHR13871:SF60 | SUPFAM:SSF57889 | UniParc:UPI00000A8AFD |
| SEG:seg | : | : | : | : | : |
Description
At2g44370 [Source:UniProtKB/TrEMBL;Acc:O64871]
Coordinates
chr2:-:18321951..18323121
Molecular Weight (calculated)
28023.1 Da
IEP (calculated)
6.496
GRAVY (calculated)
-0.612
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MAARKPSVRH PSHNHPLRSH KAQVEEEIIC SGCDLDLIGA AFKCTKSECD YFLHKSCFEL PRETRHKAHP DHPLILLYSP PYESTYTCDA CGEYGSGFTY
101: NCSICQYDVH VGCVSMPESV EREGHAHPLT LLYRSPYQNG LIFNCDVCQE TVPDNLWSYY CKECDYGTHL HSCAVEEEEA EEEEPKRGGG SARGNTKSGG
201: NKGGRGSAAS ELAAMLEAQR EMEKMQIELH MEMQRAKIAK KARKACLKLI
101: NCSICQYDVH VGCVSMPESV EREGHAHPLT LLYRSPYQNG LIFNCDVCQE TVPDNLWSYY CKECDYGTHL HSCAVEEEEA EEEEPKRGGG SARGNTKSGG
201: NKGGRGSAAS ELAAMLEAQR EMEKMQIELH MEMQRAKIAK KARKACLKLI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.