Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400074532 | Potato | nucleus | 64.74 | 65.39 |
| Solyc01g073800.2.1 | Tomato | nucleus | 23.68 | 37.9 |
| Solyc01g073830.1.1 | Tomato | cytosol, nucleus, peroxisome | 28.72 | 36.77 |
| Solyc01g073820.2.1 | Tomato | cytosol, extracellular, nucleus | 23.43 | 35.91 |
| Solyc01g073850.1.1 | Tomato | cytosol | 9.82 | 35.14 |
| Solyc01g073880.2.1 | Tomato | cytosol | 16.62 | 34.2 |
| Solyc01g073810.2.1 | Tomato | nucleus | 20.65 | 32.93 |
| VIT_08s0007g06620.t01 | Wine grape | cytosol | 19.14 | 30.16 |
| AT2G42060.1 | Thale cress | cytosol | 19.65 | 29.1 |
| Solyc01g073860.2.1 | Tomato | cytosol | 16.88 | 28.39 |
| CDY22552 | Canola | cytosol | 19.14 | 27.94 |
| CDY35387 | Canola | cytosol | 18.89 | 27.57 |
| Bra000252.1-P | Field mustard | cytosol | 18.89 | 27.57 |
| Solyc01g073840.1.1 | Tomato | nucleus | 29.72 | 25.71 |
| Solyc12g038680.1.1 | Tomato | nucleus | 10.33 | 18.98 |
| Solyc03g097960.1.1 | Tomato | cytosol | 15.62 | 17.56 |
| Solyc06g072460.1.1 | Tomato | cytosol | 16.12 | 17.3 |
| Solyc01g073890.2.1 | Tomato | cytosol | 15.87 | 16.54 |
| Solyc02g068680.1.1 | Tomato | nucleus | 17.13 | 14.75 |
| Solyc08g014370.1.1 | Tomato | nucleus, plasma membrane, plastid | 17.63 | 13.13 |
Protein Annotations
| EnsemblPlants:Solyc01g073780.2.1 | EnsemblPlantsGene:Solyc01g073780.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004791 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0098869 |
| InterPro:DC1 | PANTHER:PTHR13871 | PANTHER:PTHR13871:SF60 | PFAM:PF03107 | SEG:seg | SUPFAM:SSF57889 |
| UniParc:UPI0002761935 | UniProt:K4AXC4 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr1:-:81152883..81154238
Molecular Weight (calculated)
45176.2 Da
IEP (calculated)
5.948
GRAVY (calculated)
-0.741
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MKYQDNQHFS HHHILRKLVL DENEELQCQA CENSIFVPFH GCISCNFYLH DNCLNAPRSL IHPSHPSHPL TLLPTPTYST RSFTCNACGS EGRSCSLSCA
101: HCEFDLHMQC ALLPQTVLLP QHHYHELKLI FDSSFGDEDE SCIFVCDLCN GKVEHNSWLY YCADCDFGTH IECSSISKYV NKPKEDAVIT KSNEELVISK
201: STKIPVGMTD KKTSQNPKMK VVVESPVEKI AEELSEAEEN ALIMEPNLEE PINKEITEQV FNTSTKDPVR KTEKKFAKSV RVLNPKMKTV EKPADKSEEE
301: NEEILKPKEV PTRRKTKKKT DKNPGENPKR KPVSESSQDE NSADNLRGGG EEEESSELTY YEAQRRLKEQ HMKNMIILQA MDNAASYVGP SGGYYYY
101: HCEFDLHMQC ALLPQTVLLP QHHYHELKLI FDSSFGDEDE SCIFVCDLCN GKVEHNSWLY YCADCDFGTH IECSSISKYV NKPKEDAVIT KSNEELVISK
201: STKIPVGMTD KKTSQNPKMK VVVESPVEKI AEELSEAEEN ALIMEPNLEE PINKEITEQV FNTSTKDPVR KTEKKFAKSV RVLNPKMKTV EKPADKSEEE
301: NEEILKPKEV PTRRKTKKKT DKNPGENPKR KPVSESSQDE NSADNLRGGG EEEESSELTY YEAQRRLKEQ HMKNMIILQA MDNAASYVGP SGGYYYY
001: MGSGKTNRPS VRHPSHNHPL RVFNSKEEDE IICSGCEHDL IGQAFKCTKS ECDYFLHKSC FDLPGEIHHK SHTNHPLTLL HSPPNGLSTY TCDACGEYGS
101: AFTYHCSECK YHVHVGCAFV PENVKREDHE HPLTLLYNTP CKGRKDGVVF ICDVCEVDVS ENLWVYYCKE CDYGTHVHSC TTNEDNGPKK GGEEEGESSS
201: LSTSRIKSLM EAEKEMREMA IIHQLQLDAL DAAGSYVGSW EPRRKDYW
101: AFTYHCSECK YHVHVGCAFV PENVKREDHE HPLTLLYNTP CKGRKDGVVF ICDVCEVDVS ENLWVYYCKE CDYGTHVHSC TTNEDNGPKK GGEEEGESSS
201: LSTSRIKSLM EAEKEMREMA IIHQLQLDAL DAAGSYVGSW EPRRKDYW
Arabidopsis Description
Cysteine/Histidine-rich C1 domain family protein [Source:UniProtKB/TrEMBL;Acc:Q9SL28]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.