Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g073850.1.1 | Tomato | cytosol | 20.21 | 35.14 |
| Solyc01g073860.2.1 | Tomato | cytosol | 36.27 | 29.66 |
| Solyc01g073800.2.1 | Tomato | nucleus | 31.61 | 24.6 |
| Solyc01g073810.2.1 | Tomato | nucleus | 30.05 | 23.29 |
| Solyc01g073820.2.1 | Tomato | cytosol, extracellular, nucleus | 29.53 | 22.01 |
| Solyc12g038680.1.1 | Tomato | nucleus | 23.83 | 21.3 |
| Solyc01g073830.1.1 | Tomato | cytosol, nucleus, peroxisome | 32.64 | 20.32 |
| Solyc06g072460.1.1 | Tomato | cytosol | 33.16 | 17.3 |
| Solyc03g097960.1.1 | Tomato | cytosol | 30.57 | 16.71 |
| Solyc01g073780.2.1 | Tomato | nucleus | 34.2 | 16.62 |
| Solyc01g073890.2.1 | Tomato | cytosol | 31.61 | 16.01 |
| Solyc01g073840.1.1 | Tomato | nucleus | 31.61 | 13.29 |
| Solyc02g068680.1.1 | Tomato | nucleus | 29.02 | 12.15 |
| Solyc08g014370.1.1 | Tomato | nucleus, plasma membrane, plastid | 30.05 | 10.88 |
Protein Annotations
| EnsemblPlants:Solyc01g073880.2.1 | EnsemblPlantsGene:Solyc01g073880.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004791 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0098869 |
| InterPro:DC1 | PANTHER:PTHR13871 | PANTHER:PTHR13871:SF60 | PFAM:PF03107 | SUPFAM:SSF57889 | UniParc:UPI000276193E |
| UniProt:K4AXD3 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:81211353..81211961
Molecular Weight (calculated)
21908.9 Da
IEP (calculated)
5.424
GRAVY (calculated)
-0.246
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIPPTEEFS HFTHRHPLIK ISDILDEEDQ VICSGCEHDL SSGPAYTCTK LNCNFILHDS CFDLPRQIKH KSHPKHALSL RFFPPYNDGE FTCDACGNSG
101: HAFTFHCDKC KFDLHVECAS LPEIEEREDH QHPLTLCYNS SNLFIGKEVE VDVMCYVCKN GVGKSCWFYC CLACKCGAHL DCVSTQEIQV LDI
101: HAFTFHCDKC KFDLHVECAS LPEIEEREDH QHPLTLCYNS SNLFIGKEVE VDVMCYVCKN GVGKSCWFYC CLACKCGAHL DCVSTQEIQV LDI
001: MASRKPVNRP SVRHASHNHP LRVFKARDED EVVCSGCELE LTGQAFKCMK SDCDYFLHKS CFDLPRETNH KSHPNHSLTL LHSPPYGQSY TCDACGEYGS
101: GFTYNCSECQ YDVHVGCAFI PETVEREDHE HPLTLLYNTP CKGREDGAKF ICDVCEEKMS ENLWVYYCKE CDYGTHVHSC AVYEDHESEK RGGGREEGEA
201: SSAVSRMKSL MKAQDEMAAL QLEARIRNDT NNAILDLWDS PKRRYYY
101: GFTYNCSECQ YDVHVGCAFI PETVEREDHE HPLTLLYNTP CKGREDGAKF ICDVCEEKMS ENLWVYYCKE CDYGTHVHSC AVYEDHESEK RGGGREEGEA
201: SSAVSRMKSL MKAQDEMAAL QLEARIRNDT NNAILDLWDS PKRRYYY
Arabidopsis Description
At2g44380 [Source:UniProtKB/TrEMBL;Acc:O64872]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.