Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34801 | Canola | plastid | 96.53 | 94.56 |
| CDY20281 | Canola | plastid | 91.67 | 89.19 |
| CDY39693 | Canola | plastid | 91.67 | 89.19 |
| AT2G24090.1 | Thale cress | plastid | 81.94 | 81.38 |
| KRH02999 | Soybean | plastid | 59.72 | 62.32 |
| VIT_16s0115g00310.t01 | Wine grape | plastid | 64.58 | 60.78 |
| VIT_16s0115g00080.t01 | Wine grape | plastid | 63.89 | 60.13 |
| KRH72345 | Soybean | plastid | 59.72 | 58.5 |
| GSMUA_AchrUn_... | Banana | plastid | 54.17 | 55.32 |
| GSMUA_Achr1P10170_001 | Banana | plastid | 57.64 | 53.9 |
| PGSC0003DMT400029160 | Potato | plastid | 54.17 | 51.66 |
| Solyc07g006000.2.1 | Tomato | nucleus, plastid | 54.17 | 50.32 |
| TraesCS7D01G499800.1 | Wheat | plastid | 48.61 | 50.0 |
| EER88723 | Sorghum | plastid | 48.61 | 49.3 |
| TraesCSU01G093800.1 | Wheat | plastid | 47.92 | 49.29 |
| Zm00001d046555_P001 | Maize | plastid | 48.61 | 48.95 |
| Os06t0647100-01 | Rice | extracellular | 49.31 | 48.63 |
| HORVU7Hr1G114170.2 | Barley | cytosol, mitochondrion, plastid | 47.92 | 44.23 |
| TraesCS7B01G421100.1 | Wheat | cytosol | 48.61 | 33.65 |
Protein Annotations
| MapMan:17.7.2.1.30 | Gene3D:2.40.50.530 | GO:A0A078CI03 | EnsemblPlants:CDX76841 | ProteinID:CDX76841 | ProteinID:CDX76841.1 |
| GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00127348001 | HAMAP:MF_00514 | PFAM:PF01632 | PRINTS:PR00064 |
| ScanProsite:PS00936 | PANTHER:PTHR33343 | InterPro:Ribosomal_L35 | InterPro:Ribosomal_L35_CS | InterPro:Ribosomal_L35_non-mt | InterPro:Ribosomal_L35_sf |
| SUPFAM:SSF143034 | TIGRFAMs:TIGR00001 | UniParc:UPI0004EC1F3B | SEG:seg | : | : |
Description
BnaC08g34270D
Coordinates
chrLK031808:-:1369426..1370618
Molecular Weight (calculated)
16017.8 Da
IEP (calculated)
12.424
GRAVY (calculated)
-0.396
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLSMASVN LSFPPLRSSP KVSTHASVQF ARFSSSSLAS AHCISGLRAV LPQKISTVVS QRLQTLTVFA HKGYKMKTHK ASAKRFRVTG RGKIVRRRSG
101: KQHLLAKKNN KRKLRLSKMH EVSRSDYDNV IGALPYLKVN RKAT
101: KQHLLAKKNN KRKLRLSKMH EVSRSDYDNV IGALPYLKVN RKAT
001: MASLSMASVN VSFCHPLRSS SPKVSLRSSV HFATSLSSSH SISGLRAVLP LKISTVASPN SQKLHSFTVF AHKGYKMKTH KASAKRFRVT GRGKIVRRRS
101: GKQHLLAKKN NKRKLRLSKM TEVNRSDYDN VIGALPYLKV NRKAT
101: GKQHLLAKKN NKRKLRLSKM TEVNRSDYDN VIGALPYLKV NRKAT
Arabidopsis Description
RPL3550S ribosomal protein L35, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ55]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.