Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G499800.1 | Wheat | plastid | 87.82 | 97.86 |
| TraesCSU01G093800.1 | Wheat | plastid | 85.9 | 95.71 |
| Os06t0647100-01 | Rice | extracellular | 66.03 | 70.55 |
| TraesCS7B01G421100.1 | Wheat | cytosol | 92.31 | 69.23 |
| EER88723 | Sorghum | plastid | 56.41 | 61.97 |
| Zm00001d046555_P001 | Maize | plastid | 55.77 | 60.84 |
| GSMUA_Achr1P10170_001 | Banana | plastid | 48.72 | 49.35 |
| CDX76841 | Canola | plastid | 44.23 | 47.92 |
| AT2G24090.1 | Thale cress | plastid | 44.23 | 47.59 |
| Bra032122.1-P | Field mustard | plastid | 44.23 | 46.62 |
| CDY39693 | Canola | plastid | 44.23 | 46.62 |
| CDY20281 | Canola | plastid | 44.23 | 46.62 |
| CDY34801 | Canola | plastid | 43.59 | 46.26 |
| Bra039227.1-P | Field mustard | plastid | 43.59 | 46.26 |
| VIT_16s0115g00310.t01 | Wine grape | plastid | 44.87 | 45.75 |
| KRH02999 | Soybean | plastid | 40.38 | 45.65 |
| KRH72345 | Soybean | plastid | 42.31 | 44.9 |
| GSMUA_AchrUn_... | Banana | plastid | 40.38 | 44.68 |
| VIT_16s0115g00080.t01 | Wine grape | plastid | 43.59 | 44.44 |
| PGSC0003DMT400029160 | Potato | plastid | 41.03 | 42.38 |
| Solyc07g006000.2.1 | Tomato | nucleus, plastid | 41.03 | 41.29 |
Protein Annotations
| MapMan:17.7.2.1.30 | Gene3D:2.40.50.530 | UniProt:A0A287XVG3 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 |
| GO:GO:0019538 | EnsemblPlantsGene:HORVU7Hr1G114170 | EnsemblPlants:HORVU7Hr1G114170.2 | HAMAP:MF_00514 | PFAM:PF01632 | PRINTS:PR00064 |
| ScanProsite:PS00936 | PANTHER:PTHR33343 | InterPro:Ribosomal_L35 | InterPro:Ribosomal_L35_CS | InterPro:Ribosomal_L35_non-mt | InterPro:Ribosomal_L35_sf |
| SUPFAM:SSF143034 | TIGRFAMs:TIGR00001 | UniParc:UPI000B472B83 | SEG:seg | : | : |
Description
50S ribosomal protein L35 [Source:UniProtKB/TrEMBL;Acc:A0A287XVG3]
Coordinates
chrchr7H:+:638911388..638913337
Molecular Weight (calculated)
16848.9 Da
IEP (calculated)
12.294
GRAVY (calculated)
-0.456
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: RGRRRSEQEQ REREEAMAMS LSLARQALPP VLQALPGRRP AHSSLAFPAN PFFGAPLAVA AAGAAALSPA APLPRPLAVV AAGKGYKMKT HKASAKRFRV
101: TGTGKIVRRC AGKQHLLSKK NAKRRKRLSK MVQVNKSDYS NVMGALPYLK VNKKAG
101: TGTGKIVRRC AGKQHLLSKK NAKRRKRLSK MVQVNKSDYS NVMGALPYLK VNKKAG
001: MASLSMASVN VSFCHPLRSS SPKVSLRSSV HFATSLSSSH SISGLRAVLP LKISTVASPN SQKLHSFTVF AHKGYKMKTH KASAKRFRVT GRGKIVRRRS
101: GKQHLLAKKN NKRKLRLSKM TEVNRSDYDN VIGALPYLKV NRKAT
101: GKQHLLAKKN NKRKLRLSKM TEVNRSDYDN VIGALPYLKV NRKAT
Arabidopsis Description
RPL3550S ribosomal protein L35, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ55]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.