Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G499800.1 | Wheat | plastid | 66.83 | 99.29 |
| TraesCSU01G093800.1 | Wheat | plastid | 65.87 | 97.86 |
| HORVU7Hr1G114170.2 | Barley | cytosol, mitochondrion, plastid | 69.23 | 92.31 |
| Os06t0647100-01 | Rice | extracellular | 50.96 | 72.6 |
| EER88723 | Sorghum | plastid | 42.79 | 62.68 |
| Zm00001d046555_P001 | Maize | plastid | 42.31 | 61.54 |
| GSMUA_Achr1P10170_001 | Banana | plastid | 37.02 | 50.0 |
| CDX76841 | Canola | plastid | 33.65 | 48.61 |
| VIT_16s0115g00310.t01 | Wine grape | plastid | 34.62 | 47.06 |
| CDY34801 | Canola | plastid | 33.17 | 46.94 |
| Bra039227.1-P | Field mustard | plastid | 33.17 | 46.94 |
| AT2G24090.1 | Thale cress | plastid | 32.69 | 46.9 |
| CDY39693 | Canola | plastid | 33.17 | 46.62 |
| CDY20281 | Canola | plastid | 33.17 | 46.62 |
| Bra032122.1-P | Field mustard | plastid | 33.17 | 46.62 |
| KRH02999 | Soybean | plastid | 30.77 | 46.38 |
| VIT_16s0115g00080.t01 | Wine grape | plastid | 33.65 | 45.75 |
| GSMUA_AchrUn_... | Banana | plastid | 30.29 | 44.68 |
| KRH72345 | Soybean | plastid | 31.25 | 44.22 |
| PGSC0003DMT400029160 | Potato | plastid | 30.77 | 42.38 |
| Solyc07g006000.2.1 | Tomato | nucleus, plastid | 31.25 | 41.94 |
Protein Annotations
| MapMan:17.7.2.1.30 | Gene3D:2.40.50.530 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0019538 |
| HAMAP:MF_00514 | PFAM:PF01632 | PRINTS:PR00064 | ScanProsite:PS00936 | PANTHER:PTHR33343 | InterPro:Ribosomal_L35 |
| InterPro:Ribosomal_L35_CS | InterPro:Ribosomal_L35_non-mt | InterPro:Ribosomal_L35_sf | SUPFAM:SSF143034 | TIGRFAMs:TIGR00001 | EnsemblPlantsGene:TraesCS7B01G421100 |
| EnsemblPlants:TraesCS7B01G421100.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7B:-:690239172..690240703
Molecular Weight (calculated)
22577.0 Da
IEP (calculated)
12.247
GRAVY (calculated)
-0.239
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MLYAAFFIRP APYVGRFDGP CNVNSCEFRP YAIRSARLSP LSNPLRLTPA RGRRRTPPTR TTREREEAMA MSLSLARLAL PPVLQALPGR RLAHSALAFP
101: ANSFFGAPLA VAAAGAAALS PAAPLPRPLA VVAAGKGYKM KTHKASAKRF RVTGTGKIVR RCAGKQHLLS KKNAKRRKRL SKMVQVNKSD YSNVMGALPY
201: LKVNKKAG
101: ANSFFGAPLA VAAAGAAALS PAAPLPRPLA VVAAGKGYKM KTHKASAKRF RVTGTGKIVR RCAGKQHLLS KKNAKRRKRL SKMVQVNKSD YSNVMGALPY
201: LKVNKKAG
001: MASLSMASVN VSFCHPLRSS SPKVSLRSSV HFATSLSSSH SISGLRAVLP LKISTVASPN SQKLHSFTVF AHKGYKMKTH KASAKRFRVT GRGKIVRRRS
101: GKQHLLAKKN NKRKLRLSKM TEVNRSDYDN VIGALPYLKV NRKAT
101: GKQHLLAKKN NKRKLRLSKM TEVNRSDYDN VIGALPYLKV NRKAT
Arabidopsis Description
RPL3550S ribosomal protein L35, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ55]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.