Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 4
- plasma membrane 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85631 | Canola | plastid | 90.71 | 90.71 |
| CDY65989 | Canola | plastid | 85.5 | 84.87 |
| CDY09825 | Canola | plastid | 84.76 | 84.76 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane | 57.62 | 79.08 |
| AT5G13720.1 | Thale cress | plastid | 71.75 | 73.66 |
| Solyc01g087710.2.1 | Tomato | nucleus | 59.85 | 73.18 |
| KRH13984 | Soybean | plastid | 62.83 | 63.53 |
| VIT_13s0064g00200.t01 | Wine grape | plastid | 65.43 | 63.31 |
| Solyc01g087680.2.1 | Tomato | plastid | 62.08 | 61.62 |
| CDY09866 | Canola | mitochondrion | 33.46 | 44.12 |
| CDX99380 | Canola | plastid | 31.23 | 32.81 |
| CDY69061 | Canola | plastid | 16.36 | 28.95 |
| CDY63350 | Canola | mitochondrion | 23.79 | 23.36 |
| CDY52071 | Canola | mitochondrion | 23.79 | 23.1 |
Protein Annotations
| EnsemblPlants:CDX91101 | EnsemblPlantsGene:GSBRNA2T00151881001 | GO:A0A078DPG2 | InterPro:UPF0114 | InterPro:UPF0114_pln | PANTHER:PTHR31721 |
| PANTHER:PTHR31721:SF1 | PFAM:PF03350 | PIRSF:PIRSF022348 | ProteinID:CDX91101 | ProteinID:CDX91101.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0004EB288C | MapMan:35.2 | : | : | : |
Description
BnaC02g04960D
Coordinates
chrLK031865:-:774829..776264
Molecular Weight (calculated)
29704.2 Da
IEP (calculated)
9.285
GRAVY (calculated)
0.257
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MAALYTLVSS TRLSVSLPYH HKLHTRRRFH FPLATLASSS PPDSSASSNS SSIPVANGNT LSNSYGTHDK VVDDNNSPFA RFFRSTESNV ERIIFDFRFL
101: ALLAVGGSLA GSLLCFLNGC VYIIEAYKVY WTNCVKGIHT GKMVLHLVEA IDVYLAGTVM LIFSMGLYGL FISNSPPDVP SESDRALKAS SLFGMFAMKE
201: RPKWMKISSL DELKTKVGHV IVMILLVKMF ERSKMVTIAT GLDLLSYSVC IFLSSASLYI LHNLHKGEN
101: ALLAVGGSLA GSLLCFLNGC VYIIEAYKVY WTNCVKGIHT GKMVLHLVEA IDVYLAGTVM LIFSMGLYGL FISNSPPDVP SESDRALKAS SLFGMFAMKE
201: RPKWMKISSL DELKTKVGHV IVMILLVKMF ERSKMVTIAT GLDLLSYSVC IFLSSASLYI LHNLHKGEN
001: MALSSLISAT PLSLSVPRYL VLPTRRRFHL PLATLDSSPP ESSASSSIPT SIPVNGNTLP SSYGTRKDDS PFAQFFRSTE SNVERIIFDF RFLALLAVGG
101: SLAGSLLCFL NGCVYIVEAY KVYWTNCSKG IHTGQMVLRL VEAIDVYLAG TVMLIFSMGL YGLFISHSPH DVPPESDRAL RSSSLFGMFA MKERPKWMKI
201: SSLDELKTKV GHVIVMILLV KMFERSKMVT IATGLDLLSY SVCIFLSSAS LYILHNLHKG ET
101: SLAGSLLCFL NGCVYIVEAY KVYWTNCSKG IHTGQMVLRL VEAIDVYLAG TVMLIFSMGL YGLFISHSPH DVPPESDRAL RSSSLFGMFA MKERPKWMKI
201: SSLDELKTKV GHVIVMILLV KMFERSKMVT IATGLDLLSY SVCIFLSSAS LYILHNLHKG ET
Arabidopsis Description
Uncharacterized protein At5g13720 [Source:UniProtKB/TrEMBL;Acc:Q9FNA1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.