Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
- plasma membrane 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra008808.1-P | Field mustard | plastid | 98.88 | 98.52 |
CDY65989 | Canola | plastid | 97.77 | 97.05 |
CDX85631 | Canola | plastid | 89.59 | 89.59 |
CDX91101 | Canola | plastid | 84.76 | 84.76 |
GSMUA_Achr11P... | Banana | extracellular, plasma membrane | 56.51 | 77.55 |
Solyc01g087710.2.1 | Tomato | nucleus | 60.22 | 73.64 |
AT5G13720.1 | Thale cress | plastid | 70.63 | 72.52 |
KRH13984 | Soybean | plastid | 60.97 | 61.65 |
Solyc01g087680.2.1 | Tomato | plastid | 60.97 | 60.52 |
VIT_13s0064g00200.t01 | Wine grape | plastid | 62.45 | 60.43 |
CDY09866 | Canola | mitochondrion | 36.06 | 47.55 |
CDX99380 | Canola | plastid | 31.6 | 33.2 |
CDY69061 | Canola | plastid | 16.73 | 29.61 |
CDY63350 | Canola | mitochondrion | 24.16 | 23.72 |
CDY52071 | Canola | mitochondrion | 24.16 | 23.47 |
Protein Annotations
EnsemblPlants:CDY09825 | EnsemblPlantsGene:GSBRNA2T00031549001 | GO:A0A078F5U4 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
InterPro:UPF0114 | InterPro:UPF0114_pln | PANTHER:PTHR31721 | PANTHER:PTHR31721:SF1 | PFAM:PF03350 | PIRSF:PIRSF022348 |
ProteinID:CDY09825 | ProteinID:CDY09825.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EF0B3D | UniProt:A0A078F5U4 |
MapMan:35.2 | : | : | : | : | : |
Description
BnaC09g43360DBnaC09g43360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F5U4]
Coordinates
chrLK031999:+:313095..314478
Molecular Weight (calculated)
29576.4 Da
IEP (calculated)
9.312
GRAVY (calculated)
0.362
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MANLYTLASA TRLSVSLPNP HVLPTRRRFH LPLATLASSS SPESSASSTP SSIPVVNGNT LSSSYGTRDK VVVDDNSLFA RFFRSTESTV EKIIFDFRFL
101: ALLAVGGSLA GSLLCFLNGC VYVMEAYKVY WTNCVKGIHK GQMVLHLVEA IDVYLAGTVM LIFSMGLYGL FISNSPSDIL PESDRALKAS SLFGMFAMKE
201: RPKWMKISSL DELKTKVGHV IVMILLVKMF ERSKMVTIAT GLDLLSYSVC IFLSSASLYI LHNLHKGEH
101: ALLAVGGSLA GSLLCFLNGC VYVMEAYKVY WTNCVKGIHK GQMVLHLVEA IDVYLAGTVM LIFSMGLYGL FISNSPSDIL PESDRALKAS SLFGMFAMKE
201: RPKWMKISSL DELKTKVGHV IVMILLVKMF ERSKMVTIAT GLDLLSYSVC IFLSSASLYI LHNLHKGEH
001: MALSSLISAT PLSLSVPRYL VLPTRRRFHL PLATLDSSPP ESSASSSIPT SIPVNGNTLP SSYGTRKDDS PFAQFFRSTE SNVERIIFDF RFLALLAVGG
101: SLAGSLLCFL NGCVYIVEAY KVYWTNCSKG IHTGQMVLRL VEAIDVYLAG TVMLIFSMGL YGLFISHSPH DVPPESDRAL RSSSLFGMFA MKERPKWMKI
201: SSLDELKTKV GHVIVMILLV KMFERSKMVT IATGLDLLSY SVCIFLSSAS LYILHNLHKG ET
101: SLAGSLLCFL NGCVYIVEAY KVYWTNCSKG IHTGQMVLRL VEAIDVYLAG TVMLIFSMGL YGLFISHSPH DVPPESDRAL RSSSLFGMFA MKERPKWMKI
201: SSLDELKTKV GHVIVMILLV KMFERSKMVT IATGLDLLSY SVCIFLSSAS LYILHNLHKG ET
Arabidopsis Description
Uncharacterized protein At5g13720 [Source:UniProtKB/TrEMBL;Acc:Q9FNA1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.