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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr11P... Banana extracellular, plasma membrane 58.4 78.06
Solyc01g087710.2.1 Tomato nucleus 63.36 75.45
CDX85631 Canola plastid 74.43 72.49
Bra023431.1-P Field mustard plastid 73.66 71.75
CDX91101 Canola plastid 73.66 71.75
CDY65989 Canola plastid 73.28 70.85
Bra008808.1-P Field mustard plastid 72.9 70.74
CDY09825 Canola plastid 72.52 70.63
Solyc01g087680.2.1 Tomato plastid 67.18 64.94
KRH13984 Soybean plastid 64.5 63.53
VIT_13s0064g00200.t01 Wine grape plastid 66.79 62.95
Zm00001d022371_P001 Maize plastid 62.21 61.28
EER97649 Sorghum plastid 61.45 60.53
Zm00001d007072_P001 Maize plastid 59.92 59.92
Os07t0656600-01 Rice plasma membrane, plastid 58.78 57.89
TraesCS2D01G136100.1 Wheat mitochondrion 61.45 56.69
TraesCS2A01G133900.1 Wheat mitochondrion 60.69 56.58
TraesCS2B01G157500.1 Wheat mitochondrion 60.31 55.63
Os07t0656700-01 Rice mitochondrion, plastid 60.69 55.59
HORVU2Hr1G023480.3 Barley plastid 61.45 47.63
AT4G19390.1 Thale cress plastid 30.53 29.3
Protein Annotations
MapMan:35.2EntrezGene:831217UniProt:A0A178UG44ProteinID:AED91932.1ArrayExpress:AT5G13720EnsemblPlantsGene:AT5G13720
RefSeq:AT5G13720TAIR:AT5G13720RefSeq:AT5G13720-TAIR-GEnsemblPlants:AT5G13720.1TAIR:AT5G13720.1EMBL:AY150387
ProteinID:BAB08699.1GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0009507
GO:GO:0009536GO:GO:0009706GO:GO:0009941GO:GO:0016020GO:GO:0016021RefSeq:NP_196876.1
ProteinID:OAO92137.1PFAM:PF03350PIRSF:PIRSF022348PO:PO:0000013PO:PO:0000037PO:PO:0000230
PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025281PANTHER:PTHR31721PANTHER:PTHR31721:SF1UniProt:Q9FNA1TMHMM:TMhelix
InterPro:UPF0114InterPro:UPF0114_plnUniParc:UPI00000AC400SEG:seg::
Description
Uncharacterized protein At5g13720 [Source:UniProtKB/TrEMBL;Acc:Q9FNA1]
Coordinates
chr5:+:4427783..4429295
Molecular Weight (calculated)
28913.5 Da
IEP (calculated)
9.105
GRAVY (calculated)
0.324
Length
262 amino acids
Sequence
(BLAST)
001: MALSSLISAT PLSLSVPRYL VLPTRRRFHL PLATLDSSPP ESSASSSIPT SIPVNGNTLP SSYGTRKDDS PFAQFFRSTE SNVERIIFDF RFLALLAVGG
101: SLAGSLLCFL NGCVYIVEAY KVYWTNCSKG IHTGQMVLRL VEAIDVYLAG TVMLIFSMGL YGLFISHSPH DVPPESDRAL RSSSLFGMFA MKERPKWMKI
201: SSLDELKTKV GHVIVMILLV KMFERSKMVT IATGLDLLSY SVCIFLSSAS LYILHNLHKG ET
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.