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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 4
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plasma membrane, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:plasma membrane
 plastid: 20089766
plastid: 22065420
plastid: 23198870
msms PMID: 20089766 doi
G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.
msms PMID: 23198870 doi
M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.
msms PMID: 22065420 doi
W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr11P... Banana extracellular, plasma membrane 58.27 79.08
Zm00001d007072_P001 Maize plastid 77.44 78.63
Solyc01g087710.2.1 Tomato nucleus 55.26 66.82
TraesCS2D01G136100.1 Wheat mitochondrion 69.17 64.79
Os07t0656700-01 Rice mitochondrion, plastid 69.17 64.34
TraesCS2B01G157500.1 Wheat mitochondrion 68.42 64.08
TraesCS2A01G133900.1 Wheat mitochondrion 67.67 64.06
AT5G13720.1 Thale cress plastid 61.28 62.21
Bra023431.1-P Field mustard plastid 62.03 61.34
KRH13984 Soybean plastid 61.28 61.28
Bra008808.1-P Field mustard plastid 62.03 61.11
Solyc01g087680.2.1 Tomato plastid 60.15 59.04
VIT_13s0064g00200.t01 Wine grape plastid 61.28 58.63
HORVU2Hr1G023480.3 Barley plastid 65.79 51.78
CDY09866 Canola mitochondrion 27.07 35.29
Zm00001d014744_P001 Maize plastid 29.7 31.47
Protein Annotations
EMBL:BT034923EnsemblPlants:Zm00001d022371_P001EnsemblPlants:Zm00001d022371_T001EnsemblPlantsGene:Zm00001d022371EntrezGene:100192831GO:GO:0005575
GO:GO:0016020GO:GO:0016021InterPro:UPF0114InterPro:UPF0114_plnPANTHER:PTHR31721PANTHER:PTHR31721:SF1
PFAM:PF03350PIRSF:PIRSF022348ProteinID:ONM60225.1SEG:segSignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI00017B6845UniProt:B4FCT5MapMan:35.2:::
Description
Uncharacterised protein family (UPF0114)
Coordinates
chr7:+:176262384..176263895
Molecular Weight (calculated)
28128.7 Da
IEP (calculated)
8.714
GRAVY (calculated)
0.504
Length
266 amino acids
Sequence
(BLAST)
001: MALLLLRGCA APPAVHAAPA GSRLLPPALP RRRLVAVASS ASPAPSGEVA SSSQDGRGYG TVGGPNGHAI APATVTKSTA VETTVERVIF DFRFLALLAV
101: AGSLAGSVLC FLNGCVFIKE AYQVYWSSCV KGVHTGQMVL KVVEAIDVYL AGTVMLIFGM GLYGLFISNA PASVAPESDR ALSGSSLFGM FALKERPKWM
201: NITSLDELKT KVGHVIVMIL LVKMFEKSKM VTIATGLDLL SYSICIFLSS ASLYILHNLH KGDHEE
Best Arabidopsis Sequence Match ( AT5G13720.1 )
(BLAST)
001: MALSSLISAT PLSLSVPRYL VLPTRRRFHL PLATLDSSPP ESSASSSIPT SIPVNGNTLP SSYGTRKDDS PFAQFFRSTE SNVERIIFDF RFLALLAVGG
101: SLAGSLLCFL NGCVYIVEAY KVYWTNCSKG IHTGQMVLRL VEAIDVYLAG TVMLIFSMGL YGLFISHSPH DVPPESDRAL RSSSLFGMFA MKERPKWMKI
201: SSLDELKTKV GHVIVMILLV KMFERSKMVT IATGLDLLSY SVCIFLSSAS LYILHNLHKG ET
Arabidopsis Description
Uncharacterized protein At5g13720 [Source:UniProtKB/TrEMBL;Acc:Q9FNA1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.