Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 4
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plastid:
20089766
plastid: 22065420 |
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P17350_001 | Banana | cytosol, extracellular, plasma membrane | 41.83 | 68.63 |
| TraesCS7D01G401500.1 | Wheat | plastid | 65.74 | 63.22 |
| TraesCS7B01G308000.1 | Wheat | plastid | 65.34 | 62.84 |
| Os06t0710300-01 | Rice | mitochondrion | 63.74 | 62.26 |
| TraesCS7A01G407800.1 | Wheat | plastid | 64.94 | 62.21 |
| GSMUA_Achr1P10680_001 | Banana | plasma membrane | 44.22 | 54.68 |
| VIT_02s0087g00610.t01 | Wine grape | plastid | 45.02 | 44.66 |
| Bra013392.1-P | Field mustard | plastid | 43.82 | 42.97 |
| CDX99380 | Canola | plastid | 43.82 | 42.97 |
| AT4G19390.1 | Thale cress | plastid | 45.02 | 41.39 |
| PGSC0003DMT400075309 | Potato | plastid | 39.04 | 39.2 |
| KRH39766 | Soybean | plastid | 41.04 | 39.02 |
| KRH76446 | Soybean | plastid | 40.64 | 38.64 |
| Solyc08g075280.2.1 | Tomato | plastid | 38.65 | 38.04 |
| OQU77073 | Sorghum | plastid | 58.96 | 36.19 |
| CDY69061 | Canola | plastid | 19.92 | 32.89 |
| Zm00001d022371_P001 | Maize | plastid | 31.47 | 29.7 |
| Zm00001d007072_P001 | Maize | plastid | 28.69 | 27.48 |
Protein Annotations
| EMBL:BT040550 | EnsemblPlants:Zm00001d014744_P001 | EnsemblPlants:Zm00001d014744_T001 | EnsemblPlantsGene:Zm00001d014744 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0009536 | GO:GO:0009941 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:UPF0114 | PANTHER:PTHR31721 | PANTHER:PTHR31721:SF4 | PFAM:PF03350 | PFscan:PS51257 | ProteinID:AQK67090.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI00017B7DB1 | UniProt:B4FTW2 | MapMan:35.2 | : |
Description
Uncharacterised protein family (UPF0114)
Coordinates
chr5:-:61241812..61243221
Molecular Weight (calculated)
27181.7 Da
IEP (calculated)
8.787
GRAVY (calculated)
0.438
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MKPRPLGCGC GCVPAAVGCV GWAWRPTPRP RGGGRAAGVS PKCSHSAAAA GAVQSEDRRR EVLYRPVELP GTGYGSELEA RIEKVIYACR FMTFFGICGL
101: LLGSVPCFLK GCVFVMDAFV EYYRHGAGKV ILLLVEAIEM FLIATVTFVL GTGLYELFIS NMDSFYGSNL FGLFSLPERP KWVEIKSVND LKTKLGHVIV
201: MVLLVGIFEK SKRVTITSCA DLLCFAGSIF LSSVCLYLLS KLHTTKGGSQ A
101: LLGSVPCFLK GCVFVMDAFV EYYRHGAGKV ILLLVEAIEM FLIATVTFVL GTGLYELFIS NMDSFYGSNL FGLFSLPERP KWVEIKSVND LKTKLGHVIV
201: MVLLVGIFEK SKRVTITSCA DLLCFAGSIF LSSVCLYLLS KLHTTKGGSQ A
001: MTTPCRTINA NAIAAPSPSG LIFNGFRDFV PIEKRLVISS FRGLKLPSRT TKTITSSDWS WSYRSPGRLA SASTSTSAST STSAAVTSNS TNRFEALEEG
101: IEKVIYSCRF MTFLGTLGSL LGSVLCFIKG CMYVVDSFLQ YSVNRGKVIF LLVEAIDIYL LGTVMLVFGL GLYELFISNL DTSESRTHDI VSNRSSLFGM
201: FTLKERPQWL EVKSVSELKT KLGHVIVMLL LIGLFDKSKR VVITSVTDLL CISVSIFFSS ACLFLLSRLN GSH
101: IEKVIYSCRF MTFLGTLGSL LGSVLCFIKG CMYVVDSFLQ YSVNRGKVIF LLVEAIDIYL LGTVMLVFGL GLYELFISNL DTSESRTHDI VSNRSSLFGM
201: FTLKERPQWL EVKSVSELKT KLGHVIVMLL LIGLFDKSKR VVITSVTDLL CISVSIFFSS ACLFLLSRLN GSH
Arabidopsis Description
AT4g19390/T5K18_170 [Source:UniProtKB/TrEMBL;Acc:Q94JM4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.