Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- golgi 2
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P17350_001 | Banana | cytosol, extracellular, plasma membrane | 64.53 | 85.62 |
| VIT_02s0087g00610.t01 | Wine grape | plastid | 59.11 | 47.43 |
| PGSC0003DMT400075309 | Potato | plastid | 57.64 | 46.8 |
| TraesCS7B01G308000.1 | Wheat | plastid | 58.62 | 45.59 |
| Os06t0710300-01 | Rice | mitochondrion | 57.64 | 45.53 |
| TraesCS7D01G401500.1 | Wheat | plastid | 57.64 | 44.83 |
| TraesCS7A01G407800.1 | Wheat | plastid | 57.14 | 44.27 |
| Zm00001d014744_P001 | Maize | plastid | 54.68 | 44.22 |
| Solyc08g075280.2.1 | Tomato | plastid | 55.17 | 43.92 |
| Bra013392.1-P | Field mustard | plastid | 52.71 | 41.8 |
| CDX99380 | Canola | plastid | 52.71 | 41.8 |
| KRH39766 | Soybean | plastid | 53.2 | 40.91 |
| KRH76446 | Soybean | plastid | 52.71 | 40.53 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane | 38.92 | 40.31 |
| AT4G19390.1 | Thale cress | plastid | 49.75 | 37.0 |
| CDY69061 | Canola | plastid | 23.15 | 30.92 |
| OQU77073 | Sorghum | plastid | 49.75 | 24.69 |
| GSMUA_Achr7P27370_001 | Banana | mitochondrion | 25.12 | 15.5 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P10680_001 | EnsemblPlants:GSMUA_Achr1T10680_001 | EnsemblPlantsGene:GSMUA_Achr1G10680_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:UPF0114 | PANTHER:PTHR31721 | PANTHER:PTHR31721:SF4 | PFAM:PF03350 | PIRSF:PIRSF026509 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI000296B9C9 | UniProt:M0RYS7 | MapMan:35.2 | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G10680_001]
Coordinates
chr1:-:8075597..8078486
Molecular Weight (calculated)
22712.6 Da
IEP (calculated)
10.098
GRAVY (calculated)
0.543
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MTWKRSSKRR DLSPFGLMSP QWFWKKRKCL ISQDFSLQVI YRCRFFAFLP VAGSLMGSII CFLKGCTSVI DSFGEYFLSG GKVILMLVGA IDVYLIGTVM
101: LVFGMGLYEL FISNFDIAKM SSSGSNLLGL FKLLERPRWL EIKSVNELKT KVGHVIVMAL LVGMFENSKK VTISSPADLL CFAASILLSS SCLYLLSKLH
201: ATK
101: LVFGMGLYEL FISNFDIAKM SSSGSNLLGL FKLLERPRWL EIKSVNELKT KVGHVIVMAL LVGMFENSKK VTISSPADLL CFAASILLSS SCLYLLSKLH
201: ATK
001: MGVFRAEDKN ISKKKVIYSC RFMTFLGTLG SLLGSVLCFI KGCMYVVDSF LQYSVNRGKV IFLLVEAIDI YLLGTVMLVF GLGLYELFIS NLDTSESRTH
101: DIVSNRSSLF GMFTLKERPQ WLEVKSVSEL KTKLGHVIVM LLLIGLFDKS KRVVITSVTD LLCISVSIFF SSACLFLLSR LNGSH
101: DIVSNRSSLF GMFTLKERPQ WLEVKSVSEL KTKLGHVIVM LLLIGLFDKS KRVVITSVTD LLCISVSIFF SSACLFLLSR LNGSH
Arabidopsis Description
AT4g19390/T5K18_170 [Source:UniProtKB/TrEMBL;Acc:Q94JM4]
SUBAcon: [plasma membrane,extracellular,nucleus]
SUBAcon: [plasma membrane,extracellular,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.