Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G401500.1 | Wheat | plastid | 97.7 | 97.7 |
| TraesCS7A01G407800.1 | Wheat | plastid | 91.95 | 91.6 |
| GSMUA_Achr7P17350_001 | Banana | cytosol, extracellular, plasma membrane | 42.53 | 72.55 |
| Os06t0710300-01 | Rice | mitochondrion | 64.75 | 65.76 |
| Zm00001d014744_P001 | Maize | plastid | 62.84 | 65.34 |
| GSMUA_Achr1P10680_001 | Banana | plasma membrane | 45.59 | 58.62 |
| CDX99380 | Canola | plastid | 43.68 | 44.53 |
| Bra013392.1-P | Field mustard | plastid | 43.68 | 44.53 |
| VIT_02s0087g00610.t01 | Wine grape | plastid | 42.53 | 43.87 |
| PGSC0003DMT400075309 | Potato | plastid | 40.61 | 42.4 |
| KRH39766 | Soybean | plastid | 42.53 | 42.05 |
| KRH76446 | Soybean | plastid | 42.53 | 42.05 |
| AT4G19390.1 | Thale cress | plastid | 42.91 | 41.03 |
| Solyc08g075280.2.1 | Tomato | plastid | 39.08 | 40.0 |
| CDY69061 | Canola | plastid | 21.07 | 36.18 |
| OQU77073 | Sorghum | plastid | 48.66 | 31.05 |
| TraesCS2B01G157500.1 | Wheat | mitochondrion | 31.42 | 28.87 |
| TraesCS5B01G383400.1 | Wheat | mitochondrion | 21.84 | 19.39 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G308000.1 | EnsemblPlantsGene:TraesCS7B01G308000 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0009536 | GO:GO:0009941 | InterPro:UPF0114 | PANTHER:PTHR31721 | PANTHER:PTHR31721:SF4 | PFAM:PF03350 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr7B:+:551944066..551945193
Molecular Weight (calculated)
28178.7 Da
IEP (calculated)
9.986
GRAVY (calculated)
0.287
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MMRPRPFGSG VASAAAAEVS VGAGCRGGWA WRPRPRARPG QRLRVRGAPS PHAAAPASAV HAEPHHGERF RPFGLPRAGF GSDLEAGIEK VIYACRFMAF
101: LAIAGSLAGS VLCFLKGCTF VMDAFVEYYL RGDGKVVLML IEAIDMYLIG TVMFVFGTGL YELFISNMDI AKQSHDRSSL FGLFKLPERP KWLEIRSVSD
201: LKTKLGHVIV LVLLVGISEK SKRVTITSCT DLFCFAGSIF LSSGCLYLLS KLGSTKGGSH A
101: LAIAGSLAGS VLCFLKGCTF VMDAFVEYYL RGDGKVVLML IEAIDMYLIG TVMFVFGTGL YELFISNMDI AKQSHDRSSL FGLFKLPERP KWLEIRSVSD
201: LKTKLGHVIV LVLLVGISEK SKRVTITSCT DLFCFAGSIF LSSGCLYLLS KLGSTKGGSH A
001: MTTPCRTINA NAIAAPSPSG LIFNGFRDFV PIEKRLVISS FRGLKLPSRT TKTITSSDWS WSYRSPGRLA SASTSTSAST STSAAVTSNS TNRFEALEEG
101: IEKVIYSCRF MTFLGTLGSL LGSVLCFIKG CMYVVDSFLQ YSVNRGKVIF LLVEAIDIYL LGTVMLVFGL GLYELFISNL DTSESRTHDI VSNRSSLFGM
201: FTLKERPQWL EVKSVSELKT KLGHVIVMLL LIGLFDKSKR VVITSVTDLL CISVSIFFSS ACLFLLSRLN GSH
101: IEKVIYSCRF MTFLGTLGSL LGSVLCFIKG CMYVVDSFLQ YSVNRGKVIF LLVEAIDIYL LGTVMLVFGL GLYELFISNL DTSESRTHDI VSNRSSLFGM
201: FTLKERPQWL EVKSVSELKT KLGHVIVMLL LIGLFDKSKR VVITSVTDLL CISVSIFFSS ACLFLLSRLN GSH
Arabidopsis Description
AT4g19390/T5K18_170 [Source:UniProtKB/TrEMBL;Acc:Q94JM4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.