Factsheet for Os06t0710300-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P17350_001	Banana	cytosol, extracellular, plasma membrane	42.02	70.59
TraesCS7B01G308000.1	Wheat	plastid	65.76	64.75
TraesCS7D01G401500.1	Wheat	plastid	65.37	64.37
Zm00001d014744_P001	Maize	plastid	62.26	63.74
TraesCS7A01G407800.1	Wheat	plastid	64.59	63.36
GSMUA_Achr1P10680_001	Banana	plasma membrane	45.53	57.64
Bra013392.1-P	Field mustard	plastid	45.91	46.09
CDX99380	Canola	plastid	45.91	46.09
VIT_02s0087g00610.t01	Wine grape	plastid	42.8	43.48
PGSC0003DMT400075309	Potato	plastid	42.02	43.2
AT4G19390.1	Thale cress	plastid	45.14	42.49
Solyc08g075280.2.1	Tomato	plastid	41.25	41.57
KRH76446	Soybean	plastid	38.91	37.88
KRH39766	Soybean	plastid	38.52	37.5
CDY69061	Canola	plastid	21.4	36.18
OQU77073	Sorghum	plastid	52.92	33.25
Os07t0656700-01	Rice	mitochondrion, plastid	35.8	32.17
Os07t0656600-01	Rice	plasma membrane, plastid	32.3	31.2
Os03t0739700-01	Rice	plastid	25.29	18.9

Protein Annotations

MapMan:35.2	EntrezGene:4342030	EMBL:AK121344	ProteinID:BAD53641.1	ProteinID:BAF20457.1	ProteinID:BAS99447.1
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009536	GO:GO:0009941
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:Os06g0710300	EnsemblPlants:Os06t0710300-01	PFAM:PF03350	PIRSF:PIRSF022348
PANTHER:PTHR31721	PANTHER:PTHR31721:SF4	UniProt:Q5Z9G6	TMHMM:TMhelix	InterPro:UPF0114	InterPro:UPF0114_pln
UniParc:UPI0000446DF4	RefSeq:XP_015644120.1	SEG:seg	:	:	:

Description

Uncharacterised conserved protein UCP022348 domain containing protein. (Os06t0710300-01)

Coordinates

chr6:-:30036069..30037729

Molecular Weight (calculated)

27645.1 Da

IEP (calculated)

9.063

GRAVY (calculated)

0.472

Length

257 amino acids

Sequence
(BLAST)

001: MKPRPTGFGA AAAAAAEVLV GGGCGGWAWR PRPRPATVAS TAAMSVRGPG TTQAAAAASA VHSERHRGGV HGLQLPPLRL QFTADLEARI EKVIYACRFM
101: TFLAIAGSLI GSVPCFLKGC VYVMDAFIEY YLHGGGKVTL MLVEAIDMFL VGTVMFVFGT GLYELFISNM DIAKSSSYGS NLFGLFRLPE RPEWLEIQSV
201: NDLKTKLGHV IVMVLLVGIF EKSKRVTITS CTDLFCFAAS IFLSSACLYL LSRLSSK

Best Arabidopsis Sequence Match ( AT4G19390.1 )
(BLAST)

001: MTTPCRTINA NAIAAPSPSG LIFNGFRDFV PIEKRLVISS FRGLKLPSRT TKTITSSDWS WSYRSPGRLA SASTSTSAST STSAAVTSNS TNRFEALEEG
101: IEKVIYSCRF MTFLGTLGSL LGSVLCFIKG CMYVVDSFLQ YSVNRGKVIF LLVEAIDIYL LGTVMLVFGL GLYELFISNL DTSESRTHDI VSNRSSLFGM
201: FTLKERPQWL EVKSVSELKT KLGHVIVMLL LIGLFDKSKR VVITSVTDLL CISVSIFFSS ACLFLLSRLN GSH

Arabidopsis Description

AT4g19390/T5K18_170 [Source:UniProtKB/TrEMBL;Acc:Q94JM4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.