CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39766	Soybean	plastid	87.5	87.5
GSMUA_Achr7P17350_001	Banana	cytosol, extracellular, plasma membrane	35.98	62.09
VIT_02s0087g00610.t01	Wine grape	plastid	51.89	54.15
CDX99380	Canola	plastid	52.27	53.91
Bra013392.1-P	Field mustard	plastid	51.89	53.52
GSMUA_Achr1P10680_001	Banana	plasma membrane	40.53	52.71
PGSC0003DMT400075309	Potato	plastid	48.48	51.2
Solyc08g075280.2.1	Tomato	plastid	47.35	49.02
AT4G19390.1	Thale cress	plastid	50.38	48.72
CDY69061	Canola	plastid	25.76	44.74
TraesCS7A01G407800.1	Wheat	plastid	43.94	44.27
TraesCS7D01G401500.1	Wheat	plastid	42.8	43.3
TraesCS7B01G308000.1	Wheat	plastid	42.05	42.53
Zm00001d014744_P001	Maize	plastid	38.64	40.64
Os06t0710300-01	Rice	mitochondrion	37.88	38.91
KRH13984	Soybean	plastid	32.58	32.33
OQU77073	Sorghum	plastid	35.23	22.74
KRG89511	Soybean	mitochondrion	23.86	21.58

Protein Annotations

EMBL:ACUP02000612	EnsemblPlants:KRH76446	EnsemblPlantsGene:GLYMA_01G152700	EntrezGene:100820285	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:UPF0114	InterPro:UPF0114_pln	PANTHER:PTHR31721	PANTHER:PTHR31721:SF4	PFAM:PF03350
PIRSF:PIRSF022348	ProteinID:KRH76446	ProteinID:KRH76446.1	ProteinID:KRH76447.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI00023378E4	UniProt:K7K412	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:48962922..48966835

Molecular Weight (calculated)

28729.4 Da

IEP (calculated)

9.279

GRAVY (calculated)

0.338

Length

264 amino acids

Sequence
(BLAST)

001: MKLSQTLVRT PFSTTSPALL RTQNSILSSN GKRVSVLEYQ SLRLPSCACS NSGSAVSSSS SAAAKKNPSP PAPQVVSNSG YDSAVTQELP GKLEALEEGI
101: EKAIYRCRFM AILGVFGSLT GSFLCFIKGC TFVTASFMQY FVNRSKVIQT LIEAIDVYLL GTVMLVFGMG LYELFVSNLG VDQKPSDRSS LFGLFPLKER
201: PKWLDIKTVD ELKTKLGHVI VMLLLIGLFD KSKKAVIHTP VDLLCFCVSV LLSSSCLFLL SKLN

Best Arabidopsis Sequence Match ( AT4G19390.1 )
(BLAST)

001: MTTPCRTINA NAIAAPSPSG LIFNGFRDFV PIEKRLVISS FRGLKLPSRT TKTITSSDWS WSYRSPGRLA SASTSTSAST STSAAVTSNS TNRFEALEEG
101: IEKVIYSCRF MTFLGTLGSL LGSVLCFIKG CMYVVDSFLQ YSVNRGKVIF LLVEAIDIYL LGTVMLVFGL GLYELFISNL DTSESRTHDI VSNRSSLFGM
201: FTLKERPQWL EVKSVSELKT KLGHVIVMLL LIGLFDKSKR VVITSVTDLL CISVSIFFSS ACLFLLSRLN GSH

Arabidopsis Description

AT4g19390/T5K18_170 [Source:UniProtKB/TrEMBL;Acc:Q94JM4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.