CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	extracellular, plasma membrane	60.15	81.63
Solyc01g087710.2.1	Tomato	nucleus	61.28	74.09
Solyc01g087680.2.1	Tomato	plastid	66.54	65.31
VIT_13s0064g00200.t01	Wine grape	plastid	67.67	64.75
AT5G13720.1	Thale cress	plastid	63.53	64.5
Bra023431.1-P	Field mustard	plastid	64.29	63.57
CDX85631	Canola	plastid	64.29	63.57
CDX91101	Canola	plastid	63.53	62.83
CDY65989	Canola	plastid	63.16	61.99
Bra008808.1-P	Field mustard	plastid	62.78	61.85
Zm00001d007072_P001	Maize	plastid	60.9	61.83
Zm00001d022371_P001	Maize	plastid	61.28	61.28
CDY09825	Canola	plastid	61.65	60.97
EER97649	Sorghum	plastid	60.9	60.9
Os07t0656600-01	Rice	plasma membrane, plastid	59.77	59.77
TraesCS2B01G157500.1	Wheat	mitochondrion	60.53	56.69
TraesCS2D01G136100.1	Wheat	mitochondrion	60.53	56.69
TraesCS2A01G133900.1	Wheat	mitochondrion	59.77	56.58
Os07t0656700-01	Rice	mitochondrion, plastid	59.77	55.59
HORVU2Hr1G023480.3	Barley	plastid	60.53	47.63
KRH39766	Soybean	plastid	33.83	34.09
KRH76446	Soybean	plastid	32.33	32.58
KRG89511	Soybean	mitochondrion	31.2	28.42

Protein Annotations

EntrezGene:100799451	MapMan:35.2	EMBL:ACUP02009806	EnsemblPlantsGene:GLYMA_15G276700	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	GO:GO:0009706	GO:GO:0009941
GO:GO:0016020	GO:GO:0016021	UniProt:K7MEA1	EnsemblPlants:KRH13984	ProteinID:KRH13984	ProteinID:KRH13984.1
PFAM:PF03350	PIRSF:PIRSF022348	PANTHER:PTHR31721	PANTHER:PTHR31721:SF1	TMHMM:TMhelix	InterPro:UPF0114
InterPro:UPF0114_pln	UniParc:UPI000233C158	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:51578950..51593999

Molecular Weight (calculated)

29167.0 Da

IEP (calculated)

9.007

GRAVY (calculated)

0.400

Length

266 amino acids

Sequence
(BLAST)

001: MALYSFFSPS LLYPPSHIPR RLFCPKASLS SSSPESKASQ SVSSATSTTT SPTPSVESRP PDPAFNYALT NPNGNPIVRI VRATESSIER VIFDFRFLAL
101: LAVGGSLAGS LLCFLNGCIY IIDAYKVYWS SCVKGVHTGQ MVLRLVEAID VYLAGTVMLI FGMGLYGLFI SNVPPDVPPT VDRALKGSSL FGMFAMKERP
201: KWMKICSLDE LKTKVGHVIV MILLVKMFER SKMVTIVTGL DLLCYSICIF LSSASLYILH NLHKSD

Best Arabidopsis Sequence Match ( AT5G13720.1 )
(BLAST)

001: MALSSLISAT PLSLSVPRYL VLPTRRRFHL PLATLDSSPP ESSASSSIPT SIPVNGNTLP SSYGTRKDDS PFAQFFRSTE SNVERIIFDF RFLALLAVGG
101: SLAGSLLCFL NGCVYIVEAY KVYWTNCSKG IHTGQMVLRL VEAIDVYLAG TVMLIFSMGL YGLFISHSPH DVPPESDRAL RSSSLFGMFA MKERPKWMKI
201: SSLDELKTKV GHVIVMILLV KMFERSKMVT IATGLDLLSY SVCIFLSSAS LYILHNLHKG ET

Arabidopsis Description

Uncharacterized protein At5g13720 [Source:UniProtKB/TrEMBL;Acc:Q9FNA1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.