CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007072_P001	Maize	plastid	83.08	84.35
GSMUA_Achr11P...	Banana	extracellular, plasma membrane	57.52	78.06
Solyc01g087710.2.1	Tomato	nucleus	57.89	70.0
TraesCS2A01G133900.1	Wheat	mitochondrion	71.05	67.26
TraesCS2D01G136100.1	Wheat	mitochondrion	70.68	66.2
Os07t0656700-01	Rice	mitochondrion, plastid	70.3	65.38
TraesCS2B01G157500.1	Wheat	mitochondrion	69.55	65.14
Solyc01g087680.2.1	Tomato	plastid	62.78	61.62
AT5G13720.1	Thale cress	plastid	60.53	61.45
Bra023431.1-P	Field mustard	plastid	61.65	60.97
KRH13984	Soybean	plastid	60.9	60.9
Bra008808.1-P	Field mustard	plastid	61.28	60.37
VIT_13s0064g00200.t01	Wine grape	plastid	61.28	58.63
HORVU2Hr1G023480.3	Barley	plastid	66.92	52.66
CDY09866	Canola	mitochondrion	25.94	33.82
OQU77073	Sorghum	plastid	30.83	20.05
EER93488	Sorghum	plastid	23.31	19.94

Protein Annotations

EnsemblPlants:EER97649	EnsemblPlantsGene:SORBI_3002G401000	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:UPF0114
InterPro:UPF0114_pln	PANTHER:PTHR31721	PANTHER:PTHR31721:SF1	PFAM:PF03350	PIRSF:PIRSF022348	ProteinID:EER97649
ProteinID:EER97649.2	SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00081AC915	UniProt:C5X414
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:75159481..75162499

Molecular Weight (calculated)

28316.0 Da

IEP (calculated)

9.191

GRAVY (calculated)

0.512

Length

266 amino acids

Sequence
(BLAST)

001: MALLVLRGCA TPAVHAAPAA GSRLLPPPLR RRRLVAVAST ASSAPSGEVA SSSQHGREYG IVGGPNGNAV APATATKSTV IETTVERVIF DFRFLALLAV
101: AGSLAGSLLC FLNGCVFIKE AYQVYWSSCV KGIHTGQMVL KVVEAIDVYL AGTVMLIFGM GLYGLFISNA SSDVPSASDR ALSGSSLFGM FALKERPKWM
201: KITSLDELKT KVGHVIVMIL LVKMFERSKM VTIATGLDLL SYSICIFLSS ASLYILHMLH KGDPED

Best Arabidopsis Sequence Match ( AT5G13720.1 )
(BLAST)

001: MALSSLISAT PLSLSVPRYL VLPTRRRFHL PLATLDSSPP ESSASSSIPT SIPVNGNTLP SSYGTRKDDS PFAQFFRSTE SNVERIIFDF RFLALLAVGG
101: SLAGSLLCFL NGCVYIVEAY KVYWTNCSKG IHTGQMVLRL VEAIDVYLAG TVMLIFSMGL YGLFISHSPH DVPPESDRAL RSSSLFGMFA MKERPKWMKI
201: SSLDELKTKV GHVIVMILLV KMFERSKMVT IATGLDLLSY SVCIFLSSAS LYILHNLHKG ET

Arabidopsis Description

Uncharacterized protein At5g13720 [Source:UniProtKB/TrEMBL;Acc:Q9FNA1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.