Factsheet for GSMUA_Achr11P20130_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

plastid 3
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g087710.2.1	Tomato	nucleus	75.0	66.82
KRH13984	Soybean	plastid	81.63	60.15
AT5G13720.1	Thale cress	plastid	78.06	58.4
Zm00001d007072_P001	Maize	plastid	78.06	58.4
Solyc01g087680.2.1	Tomato	plastid	80.61	58.3
VIT_13s0064g00200.t01	Wine grape	plastid	82.65	58.27
Zm00001d022371_P001	Maize	plastid	79.08	58.27
Bra023431.1-P	Field mustard	plastid	79.59	57.99
CDX85631	Canola	plastid	79.08	57.62
CDX91101	Canola	plastid	79.08	57.62
EER97649	Sorghum	plastid	78.06	57.52
Bra008808.1-P	Field mustard	plastid	78.06	56.67
CDY09825	Canola	plastid	77.55	56.51
CDY65989	Canola	plastid	78.06	56.46
Os07t0656600-01	Rice	plasma membrane, plastid	75.0	55.26
TraesCS2A01G133900.1	Wheat	mitochondrion	78.57	54.8
TraesCS2B01G157500.1	Wheat	mitochondrion	78.57	54.23
TraesCS2D01G136100.1	Wheat	mitochondrion	77.55	53.52
Os07t0656700-01	Rice	mitochondrion, plastid	78.06	53.5
GSMUA_Achr7P17350_001	Banana	cytosol, extracellular, plasma membrane	35.71	45.75
HORVU2Hr1G023480.3	Barley	plastid	78.57	45.56
GSMUA_Achr1P10680_001	Banana	plasma membrane	40.31	38.92
GSMUA_Achr7P27370_001	Banana	mitochondrion	31.12	18.54

Protein Annotations

EnsemblPlants:GSMUA_Achr11P20130_001	EnsemblPlants:GSMUA_Achr11T20130_001	EnsemblPlantsGene:GSMUA_Achr11G20130_001	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	GO:GO:0009706	GO:GO:0009941	GO:GO:0016020
GO:GO:0016021	InterPro:UPF0114	PANTHER:PTHR31721	PANTHER:PTHR31721:SF1	PFAM:PF03350	PIRSF:PIRSF026509
SEG:seg	TMHMM:TMhelix	UniParc:UPI000296407C	UniProt:M0RTU3	MapMan:35.2	:

Description

uncharacterized UPF0114 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G20130_001]

Coordinates

chr11:-:21108606..21115713

Molecular Weight (calculated)

21774.5 Da

IEP (calculated)

9.239

GRAVY (calculated)

0.738

Length

196 amino acids

Sequence
(BLAST)

001: MVKRFLLRVI CTQFCGFNIQ VIFDFRFLAL LAVGGSLAGS VLCFLNGCVY IVDAYKVYWS SCVKGVHTGQ MVLRLVEAID VYLAGTVMLI FGMGLYGLFI
101: SNVPPGIPSG IDRALKGSSL FGMFALKERP KWMQISSLDE LKTKVGHVIV MILLVKMFER SKMVTIATGQ DLLSYSICIF LSSASLYILH NLHRPE

Best Arabidopsis Sequence Match ( AT5G13720.1 )
(BLAST)

001: MALSSLISAT PLSLSVPRYL VLPTRRRFHL PLATLDSSPP ESSASSSIPT SIPVNGNTLP SSYGTRKDDS PFAQFFRSTE SNVERIIFDF RFLALLAVGG
101: SLAGSLLCFL NGCVYIVEAY KVYWTNCSKG IHTGQMVLRL VEAIDVYLAG TVMLIFSMGL YGLFISHSPH DVPPESDRAL RSSSLFGMFA MKERPKWMKI
201: SSLDELKTKV GHVIVMILLV KMFERSKMVT IATGLDLLSY SVCIFLSSAS LYILHNLHKG ET

Arabidopsis Description

Uncharacterized protein At5g13720 [Source:UniProtKB/TrEMBL;Acc:Q9FNA1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.