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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
Plant-mPloc:plasma membrane
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69061 Canola plastid 59.38 100.0
AT4G19390.1 Thale cress plastid 69.14 64.84
GSMUA_Achr7P17350_001 Banana cytosol, extracellular, plasma membrane 37.11 62.09
GSMUA_Achr1P10680_001 Banana plasma membrane 41.8 52.71
KRH39766 Soybean plastid 53.91 52.27
KRH76446 Soybean plastid 53.52 51.89
VIT_02s0087g00610.t01 Wine grape plastid 49.61 50.2
Solyc08g075280.2.1 Tomato plastid 48.44 48.63
PGSC0003DMT400075309 Potato plastid 46.48 47.6
Os06t0710300-01 Rice mitochondrion 46.09 45.91
TraesCS7A01G407800.1 Wheat plastid 45.31 44.27
Zm00001d014744_P001 Maize plastid 42.97 43.82
TraesCS7D01G401500.1 Wheat plastid 44.53 43.68
TraesCS7B01G308000.1 Wheat plastid 44.53 43.68
Bra008808.1-P Field mustard plastid 33.59 31.85
Bra023431.1-P Field mustard plastid 32.81 31.23
OQU77073 Sorghum plastid 41.41 25.92
Bra027440.1-P Field mustard mitochondrion 22.27 20.58
Protein Annotations
EnsemblPlants:Bra013392.1EnsemblPlants:Bra013392.1-PEnsemblPlantsGene:Bra013392GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0009536GO:GO:0009941GO:GO:0016020GO:GO:0016021InterPro:UPF0114
InterPro:UPF0114_plnPANTHER:PTHR31721PANTHER:PTHR31721:SF4PFAM:PF03350PIRSF:PIRSF022348SEG:seg
TMHMM:TMhelixUniParc:UPI0002546637UniProt:M4DA82MapMan:35.2::
Description
AT4G19390 (E=3e-080) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022348 (InterPro:IPR016804), Uncharacterised protein family UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13720.1); Has 553 Blast hits to 553 proteins in 219 species: Archae - 18; Bacteria - 407; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink).
Coordinates
chrA01:-:5378065..5379464
Molecular Weight (calculated)
27681.0 Da
IEP (calculated)
9.516
GRAVY (calculated)
0.396
Length
256 amino acids
Sequence
(BLAST)
001: MTTPPCRTIN ANNAIAAPSP SGMIFHGKRL VKSSSPGLNL PTKRLAWSLS SPGRFLSSPV ASSSTSAAVT SNSTNRLEAL EEGIEKVIYQ CRFMAFLGTL
101: GSLLGSVLCF IKGCQYVGDS FVQYSVNRGK VILLLVEAID TYLLGTVMLV FGMGLYELFI SNLTTSETIS HDSVSNRSSL FGMFPLKERP QWLEVKTVSE
201: LKTKLGHVIV MLLLIGLFDK SRKVAITSVA DLLCISASIF LSSACLFLLS RLNGSH
Best Arabidopsis Sequence Match ( AT4G19390.1 )
(BLAST)
001: MTTPCRTINA NAIAAPSPSG LIFNGFRDFV PIEKRLVISS FRGLKLPSRT TKTITSSDWS WSYRSPGRLA SASTSTSAST STSAAVTSNS TNRFEALEEG
101: IEKVIYSCRF MTFLGTLGSL LGSVLCFIKG CMYVVDSFLQ YSVNRGKVIF LLVEAIDIYL LGTVMLVFGL GLYELFISNL DTSESRTHDI VSNRSSLFGM
201: FTLKERPQWL EVKSVSELKT KLGHVIVMLL LIGLFDKSKR VVITSVTDLL CISVSIFFSS ACLFLLSRLN GSH
Arabidopsis Description
AT4g19390/T5K18_170 [Source:UniProtKB/TrEMBL;Acc:Q94JM4]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.