Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029483.1-P | Field mustard | cytosol, mitochondrion, plastid | 72.22 | 67.83 |
| CDX82924 | Canola | mitochondrion | 74.07 | 50.63 |
| CDX79137 | Canola | mitochondrion | 74.07 | 50.31 |
| AT4G04080.1 | Thale cress | mitochondrion | 77.78 | 49.12 |
| KRH03283 | Soybean | mitochondrion | 75.0 | 49.09 |
| KRH57077 | Soybean | mitochondrion | 75.0 | 49.09 |
| CDX76383 | Canola | mitochondrion | 74.07 | 48.78 |
| KRH54391 | Soybean | mitochondrion | 75.93 | 47.67 |
| CDY27446 | Canola | mitochondrion | 72.22 | 47.56 |
| PGSC0003DMT400046740 | Potato | mitochondrion | 72.22 | 46.99 |
| Solyc03g112900.2.1 | Tomato | mitochondrion | 71.3 | 46.39 |
| KRH19966 | Soybean | mitochondrion | 73.15 | 45.93 |
| Solyc07g007450.2.1 | Tomato | mitochondrion | 69.44 | 45.73 |
| VIT_01s0127g00450.t01 | Wine grape | mitochondrion | 45.37 | 38.28 |
| PGSC0003DMT400078947 | Potato | mitochondrion | 70.37 | 34.55 |
| CDY68710 | Canola | mitochondrion, peroxisome | 29.63 | 28.07 |
| PGSC0003DMT400035008 | Potato | mitochondrion | 27.78 | 19.11 |
| CDX94083 | Canola | nucleus | 40.74 | 15.02 |
Protein Annotations
| Gene3D:3.90.1010.10 | MapMan:7.11.2.1.2 | GO:A0A078E086 | EnsemblPlants:CDX94542 | ProteinID:CDX94542 | ProteinID:CDX94542.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016226 | GO:GO:0051536 | EnsemblPlantsGene:GSBRNA2T00157792001 | InterPro:NIF_FeS_clus_asmbl_NifU_N | PFAM:PF01592 |
| PANTHER:PTHR10093 | PANTHER:PTHR10093:SF8 | SUPFAM:SSF82649 | UniParc:UPI0004EB0361 | : | : |
Description
BnaC09g22940D
Coordinates
chrLK031882:+:925404..927541
Molecular Weight (calculated)
11970.4 Da
IEP (calculated)
7.577
GRAVY (calculated)
-0.369
Length
108 amino acids
Sequence
(BLAST)
(BLAST)
001: MYHPIVIDHF DNPRNVGSFN KNDPNVGTEF VGAPACGDLM KLQVNATEWV KGKSMEEVLT IKNSQIAKHL FLPPVKLHCS MLAEDAIKAA VKDYQKKQAE
101: ANGETFKA
101: ANGETFKA
001: MLRQTTKRAF LGLASQNPTP FPVVSRLYHP NVIDHYDNPR NVGSFDKNDP NVGTGLVGAP QCGDVMKLQV KFDGSGQIID AKFKTFGCGS AIAASSVATE
101: WVKGKSVEEV LTIKNSQIAK HLSLPPVKLH CSMLAEDAIK AAIKNYKEKQ DKANGETVET IDSTYLHGIG S
101: WVKGKSVEEV LTIKNSQIAK HLSLPPVKLH CSMLAEDAIK AAIKNYKEKQ DKANGETVET IDSTYLHGIG S
Arabidopsis Description
ISU3Iron-sulfur cluster assembly protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O81433]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.