CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, peroxisome
Any Predictor:	mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82924	Canola	mitochondrion	60.53	43.67
CDX79137	Canola	mitochondrion	60.53	43.4
VIT_01s0127g00450.t01	Wine grape	mitochondrion	47.37	42.19
CDY27446	Canola	mitochondrion	60.53	42.07
CDX76383	Canola	mitochondrion	59.65	41.46
KRH57077	Soybean	mitochondrion	57.02	39.39
KRH03283	Soybean	mitochondrion	56.14	38.79
KRH54391	Soybean	mitochondrion	56.14	37.21
KRH19966	Soybean	mitochondrion	54.39	36.05
PGSC0003DMT400046740	Potato	mitochondrion	51.75	35.54
Solyc03g112900.2.1	Tomato	mitochondrion	51.75	35.54
Solyc07g007450.2.1	Tomato	mitochondrion	49.12	34.15
CDX94542	Canola	cytosol	28.07	29.63
PGSC0003DMT400078947	Potato	mitochondrion	49.12	25.45
PGSC0003DMT400035008	Potato	mitochondrion	21.93	15.92
CDX94083	Canola	nucleus	33.33	12.97

Protein Annotations

Gene3D:3.90.1010.10	MapMan:7.11.2.1.2	GO:A0A078JQJ1	UniProt:A0A078JQJ1	EnsemblPlants:CDY68710	ProteinID:CDY68710
ProteinID:CDY68710.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016226	GO:GO:0051536	EnsemblPlantsGene:GSBRNA2T00077098001
InterPro:NIF_FeS_clus_asmbl_NifU_N	PFAM:PF01592	PANTHER:PTHR10093	PANTHER:PTHR10093:SF8	SUPFAM:SSF82649	UniParc:UPI0004EE3FD8
SEG:seg	:	:	:	:	:

Description

BnaAnng28080DBnaAnng28080D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JQJ1]

Coordinates

chrLK037834:+:454..1207

Molecular Weight (calculated)

12542.2 Da

IEP (calculated)

10.229

GRAVY (calculated)

-0.298

Length

114 amino acids

Sequence
(BLAST)

001: AVTSHLGRRH GSRGGPACGD VMKLQIKVDE KTGQIVDARF KTFGCGSAIA SSSVATEWVK GKAMEEVLTI KNTSHCKASS PLIVLQDTRL ASNQRILQPQ
101: EFLCYRKQTY LSRF

Best Arabidopsis Sequence Match ( AT4G22220.1 )
(BLAST)

001: MMLKQAAKKA LGLTSRQSTP WSVGILRTYH ENVIDHYDNP RNVGSFDKND PNVGTGLVGA PACGDVMKLQ IKVDEKTGQI VDARFKTFGC GSAIASSSVA
101: TEWVKGKAME DVLTIKNTEI AKHLSLPPVK LHCSMLAEDA IKAAVKDYKE KRVKTNGAAA AGETTQA

Arabidopsis Description

ISU1Iron-sulfur cluster assembly protein [Source:UniProtKB/TrEMBL;Acc:A0A178UZH3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.