Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY59822 | Canola | nucleus | 89.27 | 88.14 |
| CDX85424 | Canola | nucleus, plastid | 76.82 | 75.53 |
| CDX86217 | Canola | nucleus | 76.82 | 75.53 |
| AT5G30490.1 | Thale cress | nucleus | 71.67 | 70.76 |
| KRH02417 | Soybean | nucleus | 55.36 | 50.39 |
| KRH50628 | Soybean | nucleus | 52.36 | 47.66 |
| VIT_05s0020g00360.t01 | Wine grape | nucleus | 54.08 | 47.19 |
| Os01t0328500-01 | Rice | nucleus | 51.5 | 45.45 |
| TraesCS6A01G310100.1 | Wheat | nucleus | 48.5 | 45.38 |
| GSMUA_Achr1P18420_001 | Banana | nucleus | 50.21 | 45.17 |
| TraesCS6B01G340000.1 | Wheat | nucleus | 48.07 | 44.98 |
| TraesCS6D01G289500.1 | Wheat | nucleus | 48.07 | 44.98 |
| GSMUA_AchrUn_... | Banana | nucleus | 50.21 | 44.83 |
| EES02887 | Sorghum | nucleus | 50.64 | 44.36 |
| HORVU7Hr1G027240.3 | Barley | nucleus | 47.21 | 44.0 |
| Zm00001d009161_P002 | Maize | nucleus | 48.5 | 43.97 |
| Zm00001d040717_P002 | Maize | nucleus | 48.93 | 43.18 |
| Solyc04g074800.2.1 | Tomato | nucleus | 45.92 | 41.96 |
| PGSC0003DMT400079246 | Potato | nucleus | 46.35 | 39.27 |
Protein Annotations
| EnsemblPlants:CDY00015 | EnsemblPlantsGene:GSBRNA2T00109490001 | InterPro:BCNT-C | InterPro:IPR011421 | InterPro:Swc5/CFDP | ncoils:Coil |
| PANTHER:PTHR23227 | PANTHER:PTHR23227:SF51 | PFAM:PF07572 | PFscan:PS51279 | ProteinID:CDY00015 | ProteinID:CDY00015.1 |
| SEG:seg | UniParc:UPI0004EEA904 | MapMan:35.2 | : | : | : |
Description
BnaC09g02860D
Coordinates
chrLK031916:-:233991..235357
Molecular Weight (calculated)
25721.9 Da
IEP (calculated)
9.871
GRAVY (calculated)
-0.908
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPEQSERN STGSSSVSKK VSEIWERMNE GVPNKRFNFV SKTSTSSPPA KKSPNSNWKS YLGIDARERD KAVQKEDSVS VSGEEAKRIA AAALVAVRNA
101: TATAAAASSR GKIEITEVKD FAGQEIEVKR LVEAGSKEAS SSSSSAGATS GVDAVLEQIK KKQKLSVLDK TKKDWGEYKE ENKGVEDELD KYKKSSDKYL
201: DKVSFLERAD YRQFEKERDA RLALQSKRRL DDV
101: TATAAAASSR GKIEITEVKD FAGQEIEVKR LVEAGSKEAS SSSSSAGATS GVDAVLEQIK KKQKLSVLDK TKKDWGEYKE ENKGVEDELD KYKKSSDKYL
201: DKVSFLERAD YRQFEKERDA RLALQSKRRL DDV
001: MGSHEQSPEN NGSSTVSKKV ADIWQRMNEG VPNKRVNFVS TALPAKNSAN SNWKSYLGVN VKKKDTCVSD VQKSVLNHSC SEEAKSIAAA ALAAVRNATV
101: TAAAASSRGK IEITEVKDFA GQEIEVKRLV EADSKEALER GNKGSSSSSA APSAVDAVLE QIKKKQKLSV LDKTKKDWGE YKEEHKGVED ELDKYKKSSD
201: QYLDKVGFLE RADYRQFEKE RDARLALQSK RRHDDV
101: TAAAASSRGK IEITEVKDFA GQEIEVKRLV EADSKEALER GNKGSSSSSA APSAVDAVLE QIKKKQKLSV LDKTKKDWGE YKEEHKGVED ELDKYKKSSD
201: QYLDKVGFLE RADYRQFEKE RDARLALQSK RRHDDV
Arabidopsis Description
At5g30145 [Source:UniProtKB/TrEMBL;Acc:Q8GX81]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.