Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P18420_001 | Banana | nucleus | 74.71 | 75.29 |
| VIT_05s0020g00360.t01 | Wine grape | nucleus | 60.15 | 58.8 |
| Os01t0328500-01 | Rice | nucleus | 55.94 | 55.3 |
| Zm00001d009161_P002 | Maize | nucleus | 54.02 | 54.86 |
| HORVU7Hr1G027240.3 | Barley | nucleus | 52.11 | 54.4 |
| TraesCS6D01G289500.1 | Wheat | nucleus | 51.72 | 54.22 |
| TraesCS6B01G340000.1 | Wheat | nucleus | 51.72 | 54.22 |
| Solyc04g074800.2.1 | Tomato | nucleus | 52.87 | 54.12 |
| TraesCS6A01G310100.1 | Wheat | nucleus | 50.96 | 53.41 |
| EES02887 | Sorghum | nucleus | 54.41 | 53.38 |
| KRH50628 | Soybean | nucleus | 52.11 | 53.12 |
| Zm00001d040717_P002 | Maize | nucleus | 53.64 | 53.03 |
| KRH02417 | Soybean | nucleus | 51.72 | 52.73 |
| Bra010017.1-P | Field mustard | nucleus, plastid | 41.0 | 50.95 |
| PGSC0003DMT400079246 | Potato | nucleus | 53.26 | 50.55 |
| CDY00015 | Canola | nucleus, plastid | 44.83 | 50.21 |
| CDY59822 | Canola | nucleus | 44.83 | 49.58 |
| Bra036121.1-P | Field mustard | nucleus | 44.83 | 49.58 |
| CDX85424 | Canola | nucleus, plastid | 44.06 | 48.52 |
| AT5G30490.1 | Thale cress | nucleus | 43.3 | 47.88 |
| CDX86217 | Canola | nucleus | 42.91 | 47.26 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP09310_001 | EnsemblPlants:GSMUA_AchrUn_randomT09310_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG09310_001 | InterPro:BCNT-C | InterPro:IPR011421 | InterPro:Swc5/CFDP |
| PANTHER:PTHR23227 | PANTHER:PTHR23227:SF51 | PFAM:PF07572 | PFscan:PS51279 | SEG:seg | UniParc:UPI000294977B |
| UniProt:M0U7P1 | MapMan:35.2 | : | : | : | : |
Description
craniofacial development protein 1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG09310_001]
Coordinates
chrchrUn_random:+:43951166..43955346
Molecular Weight (calculated)
28597.6 Da
IEP (calculated)
6.329
GRAVY (calculated)
-0.815
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLGDSGSK IGASDDVVQT EQAPDPQEQC EDSERKARVE EVWKKMNSVL PNKVLKPIVN KPDSTGSTKT GKTVPDWMVA LGIVPAKTPA TNDTLGKRPA
101: SSQNGTNEEA KRLAAAALSA VKDVASATTA AGSGKVEITE VRDFAGLEIE VKKLVDPDSK EAAEKAKVPG APPTALDTIL EQIKKKPKLS VLDKTKKDWS
201: SFKDEHKGME EELDSYKKSS NQYLDKVSFL QRTDHREFEH ERDARLALQA KRRPDMREDD L
101: SSQNGTNEEA KRLAAAALSA VKDVASATTA AGSGKVEITE VRDFAGLEIE VKKLVDPDSK EAAEKAKVPG APPTALDTIL EQIKKKPKLS VLDKTKKDWS
201: SFKDEHKGME EELDSYKKSS NQYLDKVSFL QRTDHREFEH ERDARLALQA KRRPDMREDD L
001: MGSHEQSPEN NGSSTVSKKV ADIWQRMNEG VPNKRVNFVS TALPAKNSAN SNWKSYLGVN VKKKDTCVSD VQKSVLNHSC SEEAKSIAAA ALAAVRNATV
101: TAAAASSRGK IEITEVKDFA GQEIEVKRLV EADSKEALER GNKGSSSSSA APSAVDAVLE QIKKKQKLSV LDKTKKDWGE YKEEHKGVED ELDKYKKSSD
201: QYLDKVGFLE RADYRQFEKE RDARLALQSK RRHDDV
101: TAAAASSRGK IEITEVKDFA GQEIEVKRLV EADSKEALER GNKGSSSSSA APSAVDAVLE QIKKKQKLSV LDKTKKDWGE YKEEHKGVED ELDKYKKSSD
201: QYLDKVGFLE RADYRQFEKE RDARLALQSK RRHDDV
Arabidopsis Description
At5g30145 [Source:UniProtKB/TrEMBL;Acc:Q8GX81]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.