Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02887 | Sorghum | nucleus | 91.29 | 90.6 |
| Zm00001d009161_P002 | Maize | nucleus | 84.85 | 87.16 |
| Os01t0328500-01 | Rice | nucleus | 74.62 | 74.62 |
| TraesCS6D01G289500.1 | Wheat | nucleus | 68.94 | 73.09 |
| HORVU7Hr1G027240.3 | Barley | nucleus | 68.56 | 72.4 |
| TraesCS6A01G310100.1 | Wheat | nucleus | 67.8 | 71.89 |
| TraesCS6B01G340000.1 | Wheat | nucleus | 67.8 | 71.89 |
| GSMUA_Achr1P18420_001 | Banana | nucleus | 54.55 | 55.6 |
| KRH50628 | Soybean | nucleus | 53.03 | 54.69 |
| KRH02417 | Soybean | nucleus | 52.27 | 53.91 |
| GSMUA_AchrUn_... | Banana | nucleus | 53.03 | 53.64 |
| VIT_05s0020g00360.t01 | Wine grape | nucleus | 53.41 | 52.81 |
| Bra010017.1-P | Field mustard | nucleus, plastid | 41.67 | 52.38 |
| AT5G30490.1 | Thale cress | nucleus | 46.21 | 51.69 |
| Solyc04g074800.2.1 | Tomato | nucleus | 48.48 | 50.2 |
| Bra036121.1-P | Field mustard | nucleus | 44.7 | 50.0 |
| CDY59822 | Canola | nucleus | 44.32 | 49.58 |
| CDY00015 | Canola | nucleus, plastid | 43.18 | 48.93 |
| CDX85424 | Canola | nucleus, plastid | 43.18 | 48.1 |
| CDX86217 | Canola | nucleus | 42.8 | 47.68 |
| PGSC0003DMT400079246 | Potato | nucleus | 49.62 | 47.64 |
Protein Annotations
| EMBL:BT068241 | EMBL:BT087994 | EMBL:EU960557 | EnsemblPlants:Zm00001d040717_P002 | EnsemblPlants:Zm00001d040717_T002 | EnsemblPlantsGene:Zm00001d040717 |
| EntrezGene:100282347 | InterPro:BCNT-C | InterPro:IPR011421 | InterPro:Swc5/CFDP | PANTHER:PTHR23227 | PANTHER:PTHR23227:SF51 |
| PFAM:PF07572 | PFscan:PS51279 | ProteinID:ONM31869.1 | ProteinID:ONM31870.1 | SEG:seg | UniParc:UPI000182C995 |
| UniProt:B6T6E2 | MapMan:35.2 | : | : | : | : |
Description
CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 ( /.../: NCBI BLink).
Coordinates
chr3:+:59836378..59845920
Molecular Weight (calculated)
29025.0 Da
IEP (calculated)
10.111
GRAVY (calculated)
-0.997
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTSSAGDV GDSGSKGAVA DKTLTASANT SSSHQESHDV DAKSRVEDIW KKMNSGFPNK MPKPAMTKLS TTEKQKKNKP TNNWMTVLGL SPSKAHSVDQ
101: GSKNGLQQTQ HEMSEDAKKL AAKALAAAKN AAAVASGRGK VEITEVRDFA GKDIEIKKLV DANSKEAIEK ARAGGAAPSA VDNILEQIRK KQKLSVLDKT
201: KKDWGEYKEE NRGLGEELDA YKKSSNQYLD KQSFLQRTDY REFERERDAR LSMMAKRRTD TRED
101: GSKNGLQQTQ HEMSEDAKKL AAKALAAAKN AAAVASGRGK VEITEVRDFA GKDIEIKKLV DANSKEAIEK ARAGGAAPSA VDNILEQIRK KQKLSVLDKT
201: KKDWGEYKEE NRGLGEELDA YKKSSNQYLD KQSFLQRTDY REFERERDAR LSMMAKRRTD TRED
001: MGSHEQSPEN NGSSTVSKKV ADIWQRMNEG VPNKRVNFVS TALPAKNSAN SNWKSYLGVN VKKKDTCVSD VQKSVLNHSC SEEAKSIAAA ALAAVRNATV
101: TAAAASSRGK IEITEVKDFA GQEIEVKRLV EADSKEALER GNKGSSSSSA APSAVDAVLE QIKKKQKLSV LDKTKKDWGE YKEEHKGVED ELDKYKKSSD
201: QYLDKVGFLE RADYRQFEKE RDARLALQSK RRHDDV
101: TAAAASSRGK IEITEVKDFA GQEIEVKRLV EADSKEALER GNKGSSSSSA APSAVDAVLE QIKKKQKLSV LDKTKKDWGE YKEEHKGVED ELDKYKKSSD
201: QYLDKVGFLE RADYRQFEKE RDARLALQSK RRHDDV
Arabidopsis Description
At5g30145 [Source:UniProtKB/TrEMBL;Acc:Q8GX81]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.