Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86217 | Canola | nucleus | 95.78 | 95.78 |
| Bra010017.1-P | Field mustard | nucleus, plastid | 82.28 | 92.86 |
| CDY59822 | Canola | nucleus | 79.75 | 80.08 |
| CDY00015 | Canola | nucleus, plastid | 75.53 | 76.82 |
| AT5G30490.1 | Thale cress | nucleus | 75.95 | 76.27 |
| KRH02417 | Soybean | nucleus | 53.16 | 49.22 |
| KRH50628 | Soybean | nucleus | 52.32 | 48.44 |
| VIT_05s0020g00360.t01 | Wine grape | nucleus | 54.43 | 48.31 |
| TraesCS6A01G310100.1 | Wheat | nucleus | 48.95 | 46.59 |
| TraesCS6B01G340000.1 | Wheat | nucleus | 48.95 | 46.59 |
| TraesCS6D01G289500.1 | Wheat | nucleus | 48.95 | 46.59 |
| GSMUA_Achr1P18420_001 | Banana | nucleus | 50.21 | 45.95 |
| HORVU7Hr1G027240.3 | Barley | nucleus | 48.1 | 45.6 |
| Os01t0328500-01 | Rice | nucleus | 49.79 | 44.7 |
| EES02887 | Sorghum | nucleus | 49.79 | 44.36 |
| Solyc04g074800.2.1 | Tomato | nucleus | 47.68 | 44.31 |
| GSMUA_AchrUn_... | Banana | nucleus | 48.52 | 44.06 |
| Zm00001d009161_P002 | Maize | nucleus | 47.68 | 43.97 |
| Zm00001d040717_P002 | Maize | nucleus | 48.1 | 43.18 |
| PGSC0003DMT400079246 | Potato | nucleus | 47.68 | 41.09 |
Protein Annotations
| EnsemblPlants:CDX85424 | EnsemblPlantsGene:GSBRNA2T00143113001 | InterPro:BCNT-C | InterPro:IPR011421 | InterPro:Swc5/CFDP | ncoils:Coil |
| PANTHER:PTHR23227 | PANTHER:PTHR23227:SF51 | PFAM:PF07572 | PFscan:PS51279 | ProteinID:CDX85424 | ProteinID:CDX85424.1 |
| SEG:seg | UniParc:UPI0004EF1E05 | MapMan:35.2 | : | : | : |
Description
BnaC07g27350D
Coordinates
chrLK031841:-:1772887..1774332
Molecular Weight (calculated)
26182.4 Da
IEP (calculated)
9.591
GRAVY (calculated)
-0.956
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MESHNQSEKQ SSPEKSGSSS VSKKVAEMWE RMNAGVPKKR VNFHSKSSTA LPSKNSANSN WTSYLGVDAK KKKNEHTIVL KEDSVSDNSC SEEAKSIAAA
101: ALAAVRNATA TAAAASSRGK VEITEVKDFA GQEIEVKRLV EAGSKEASSS ASTSGVDAVL EQIKKKQKLS VLDKTKKDWG EYKEENKGVE DELDKYKKSS
201: DQYLDKVSFL ERADYRQFEK ERDARLALQS KRKHDDV
101: ALAAVRNATA TAAAASSRGK VEITEVKDFA GQEIEVKRLV EAGSKEASSS ASTSGVDAVL EQIKKKQKLS VLDKTKKDWG EYKEENKGVE DELDKYKKSS
201: DQYLDKVSFL ERADYRQFEK ERDARLALQS KRKHDDV
001: MGSHEQSPEN NGSSTVSKKV ADIWQRMNEG VPNKRVNFVS TALPAKNSAN SNWKSYLGVN VKKKDTCVSD VQKSVLNHSC SEEAKSIAAA ALAAVRNATV
101: TAAAASSRGK IEITEVKDFA GQEIEVKRLV EADSKEALER GNKGSSSSSA APSAVDAVLE QIKKKQKLSV LDKTKKDWGE YKEEHKGVED ELDKYKKSSD
201: QYLDKVGFLE RADYRQFEKE RDARLALQSK RRHDDV
101: TAAAASSRGK IEITEVKDFA GQEIEVKRLV EADSKEALER GNKGSSSSSA APSAVDAVLE QIKKKQKLSV LDKTKKDWGE YKEEHKGVED ELDKYKKSSD
201: QYLDKVGFLE RADYRQFEKE RDARLALQSK RRHDDV
Arabidopsis Description
At5g30145 [Source:UniProtKB/TrEMBL;Acc:Q8GX81]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.