Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 7
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020057.1-P | Field mustard | extracellular, golgi, plasma membrane | 100.0 | 100.0 |
| CDY58976 | Canola | endoplasmic reticulum, golgi, plastid | 67.71 | 61.32 |
| CDX70886 | Canola | plasma membrane | 79.17 | 9.77 |
| CDX88879 | Canola | plasma membrane | 79.17 | 9.77 |
| CDX92509 | Canola | plasma membrane | 78.12 | 9.63 |
| CDY42286 | Canola | endoplasmic reticulum, golgi, plasma membrane, plastid | 58.33 | 7.22 |
| CDX93729 | Canola | peroxisome, plasma membrane, plastid, vacuole | 51.04 | 6.76 |
| CDY15314 | Canola | plasma membrane | 50.0 | 6.62 |
| CDY71196 | Canola | endoplasmic reticulum | 8.33 | 2.12 |
| CDY28395 | Canola | endoplasmic reticulum, peroxisome, plasma membrane | 8.33 | 1.65 |
| CDX73295 | Canola | endoplasmic reticulum, golgi, plasma membrane | 6.25 | 1.44 |
| CDY58977 | Canola | endoplasmic reticulum, golgi, vacuole | 1.04 | 0.81 |
| CDX73294 | Canola | endoplasmic reticulum, golgi, vacuole | 0.0 | 0.0 |
Protein Annotations
| MapMan:35.1 | GO:A0A078I261 | UniProt:A0A078I261 | EnsemblPlants:CDY44935 | ProteinID:CDY44935 | ProteinID:CDY44935.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004576 | GO:GO:0005575 | GO:GO:0005975 | GO:GO:0006464 |
| GO:GO:0006486 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00081093001 | InterPro:Oligo_trans_STT3 | PFAM:PF02516 | PANTHER:PTHR13872 |
| PANTHER:PTHR13872:SF37 | TMHMM:TMhelix | UniPathway:UPA00378 | UniParc:UPI00025432E3 | : | : |
Description
BnaA02g04400DBnaA02g04400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I261]
Coordinates
chrLK032606:+:113090..114404
Molecular Weight (calculated)
11344.9 Da
IEP (calculated)
7.249
GRAVY (calculated)
0.490
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MRNAFGTVLS ALILVLIGVL AFSIRLFSVI KYESVINEFD PYFNYRVTQF LSKNGIYEFW NWFDDRTWNC LPWVNIDCWN HLVLGAMTTK LLPFLL
001: MAALESPLPG TPTAMRNAFG NVLSVLILVL IGVLAFSIRL FSVIKYESVI HEFDPYFNYR VTQFLSKNGI YEFWNWFDDR TWYPLGRVIG GTVYPGLTLT
101: AGTIWWGLNS LNIPLSVETV CVFTAPVFSA FASWATYLLT KEVKGSGAGL AAAALLAMVP SYISRSVAGS YDNEAVAIFA LIFTFYLYIK TLNTGSLFYA
201: TLNALAYFYM VCSWGGYTFI INLIPMHVLL CIVTGRYSPR LYIAYAPLVV LGTLLAALVP VVGFNAVLTS EHFASFLVFI IIHVVALVYY IKGILSPKMF
301: KVAVTLVVSI GMVVCFIVVA ILVALVASSP TGGWSGRSLS LLDPTYASKY IPIIASVSEH QPPTWPSYFM DINVLAFLVP AGIIACFSPL SDASSFVVLY
401: IVMSVYFSGV MVRLMLVLAP AACIMSGIAL SQAFDVFTGS IKYQLGASSN STDDAEDNTS TNNAPKDDVS AGKTDKGEEI VKERSSKKGK KKEREPADKP
501: SVKAKIKKKA LVLPLEASIV ALLLLIMLGA FYVIHCVWAA AEAYSAPSIV LTSQSRDGLH VFDDFRESYA WLSHNTDVDD KVASWWDYGY QTTAMANRTV
601: IVDNNTWNNT HIATVGTAMS SPEKAAWEIF NSLDVKYVLV VFGGLIGYPS DDINKFLWMV RIGGGVFPHI KEADYLRDGQ YRIDSEATPT MLNSLMYKLS
701: YYRFVETDGK GYDRVRRTEI GKKHFKLTHF EEVFTSHHWM VRLYKLKPPR NRIRGKAKKL KSKTSSGLSS KSAKKNPWV
101: AGTIWWGLNS LNIPLSVETV CVFTAPVFSA FASWATYLLT KEVKGSGAGL AAAALLAMVP SYISRSVAGS YDNEAVAIFA LIFTFYLYIK TLNTGSLFYA
201: TLNALAYFYM VCSWGGYTFI INLIPMHVLL CIVTGRYSPR LYIAYAPLVV LGTLLAALVP VVGFNAVLTS EHFASFLVFI IIHVVALVYY IKGILSPKMF
301: KVAVTLVVSI GMVVCFIVVA ILVALVASSP TGGWSGRSLS LLDPTYASKY IPIIASVSEH QPPTWPSYFM DINVLAFLVP AGIIACFSPL SDASSFVVLY
401: IVMSVYFSGV MVRLMLVLAP AACIMSGIAL SQAFDVFTGS IKYQLGASSN STDDAEDNTS TNNAPKDDVS AGKTDKGEEI VKERSSKKGK KKEREPADKP
501: SVKAKIKKKA LVLPLEASIV ALLLLIMLGA FYVIHCVWAA AEAYSAPSIV LTSQSRDGLH VFDDFRESYA WLSHNTDVDD KVASWWDYGY QTTAMANRTV
601: IVDNNTWNNT HIATVGTAMS SPEKAAWEIF NSLDVKYVLV VFGGLIGYPS DDINKFLWMV RIGGGVFPHI KEADYLRDGQ YRIDSEATPT MLNSLMYKLS
701: YYRFVETDGK GYDRVRRTEI GKKHFKLTHF EEVFTSHHWM VRLYKLKPPR NRIRGKAKKL KSKTSSGLSS KSAKKNPWV
Arabidopsis Description
STT3ASTT3A [Source:UniProtKB/TrEMBL;Acc:A0A178URP5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.