Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93729 | Canola | peroxisome, plasma membrane, plastid, vacuole | 96.55 | 96.55 |
| AT1G34130.1 | Thale cress | plasma membrane | 94.48 | 93.2 |
| CDX73295 | Canola | endoplasmic reticulum, golgi, plasma membrane | 52.69 | 91.83 |
| Solyc03g098600.2.1 | Tomato | nucleus, plastid, unclear | 88.69 | 88.69 |
| PGSC0003DMT400026302 | Potato | endoplasmic reticulum, golgi, plasma membrane | 88.14 | 88.14 |
| GSMUA_Achr3P00140_001 | Banana | endoplasmic reticulum, golgi | 71.59 | 87.08 |
| VIT_17s0053g00140.t01 | Wine grape | plasma membrane | 88.69 | 86.77 |
| KRH38891 | Soybean | endoplasmic reticulum | 86.76 | 86.28 |
| CDY28395 | Canola | endoplasmic reticulum, peroxisome, plasma membrane | 57.52 | 85.8 |
| KRH09394 | Soybean | endoplasmic reticulum, mitochondrion | 86.34 | 85.4 |
| Zm00001d001846_P001 | Maize | plasma membrane | 84.28 | 84.98 |
| EES13093 | Sorghum | endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid | 84.14 | 84.72 |
| Zm00001d026607_P002 | Maize | plasma membrane | 84.14 | 84.72 |
| Os04t0675500-01 | Rice | plasma membrane | 83.86 | 84.33 |
| TraesCS2D01G558800.1 | Wheat | plasma membrane | 83.86 | 84.09 |
| TraesCS2B01G587900.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 83.45 | 83.68 |
| TraesCS2A01G555600.1 | Wheat | golgi | 83.31 | 83.66 |
| CDX73294 | Canola | endoplasmic reticulum, golgi, vacuole | 8.0 | 80.56 |
| HORVU2Hr1G119980.1 | Barley | cytosol | 67.03 | 73.41 |
| CDY58976 | Canola | endoplasmic reticulum, golgi, plastid | 7.72 | 52.83 |
| CDY44935 | Canola | extracellular, golgi, plasma membrane | 6.62 | 50.0 |
| CDX88879 | Canola | plasma membrane | 51.03 | 47.56 |
| CDX70886 | Canola | plasma membrane | 51.03 | 47.56 |
| CDX92509 | Canola | plasma membrane | 50.9 | 47.37 |
| CDY71196 | Canola | endoplasmic reticulum | 23.17 | 44.44 |
| CDY58977 | Canola | endoplasmic reticulum, golgi, vacuole | 7.17 | 41.94 |
| CDY42286 | Canola | endoplasmic reticulum, golgi, plasma membrane, plastid | 41.93 | 39.18 |
Protein Annotations
| MapMan:18.1.1.5.7 | Gene3D:3.40.50.12610 | GO:A0A078FR08 | UniProt:A0A078FR08 | EnsemblPlants:CDY15314 | ProteinID:CDY15314 |
| ProteinID:CDY15314.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004576 | GO:GO:0005575 | GO:GO:0005975 |
| GO:GO:0006464 | GO:GO:0006486 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00085577001 | InterPro:Oligo_trans_STT3 |
| PFAM:PF02516 | PANTHER:PTHR13872 | PANTHER:PTHR13872:SF38 | TMHMM:TMhelix | UniPathway:UPA00378 | UniParc:UPI0004EDB147 |
| SEG:seg | : | : | : | : | : |
Description
BnaC06g08000DBnaC06g08000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FR08]
Coordinates
chrLK032053:+:632263..635639
Molecular Weight (calculated)
81951.9 Da
IEP (calculated)
9.263
GRAVY (calculated)
0.306
Length
725 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAKKASPDL LNSSFSFKSL KLKTKQQELL LRVSILGLVY VLAFIARLFS VLRYESMIHE FDPYFNYRTT LYLTEKGFYE FWNWFDSESW YPLGRIIGGT
101: LYPGLMVTAA LIYWTLRFLR FFVHIREVCV LTAPFFASNT TIVAYFFGKE IWDTGAGLVA AALIAICPGY ISRSVAGSYD NEAVAIFALL LTFYLFVKAV
201: KTGSLSWALG SAFGYFYMVS AWGGYVFIIN LVPLYVLVLL ITGRYSMRLY VAYNCMYILG MLLAMQIRFV GFQHVQSGEH MGAMGVFLLM QVFYFLDWVK
301: YQLNDTKLFQ TFLRITVTSA ILVGGIALGV GTASGYISPW TGRFYSLLDP TYAKDHIPII ASVSEHQPTA WSSFMFDYHI LLFLFPAGLY FCFKRLSDAT
401: IFIVMYGLTS LYFAGVMVRL ILVATPAVCL ISAIAVSATV KNLTSLLRTK QKVPQTGSTK GVGSSKSSSK VTLDQSQPFQ KNGAIALLVG VFYLLSRYAI
501: HCTWVTSEAY SSPSIVLAAR GAHGNRIIFD DYREAYYWLR QNTPTDAKVM SWWDYGYQIT AMGNRTVIVD NNTWNNTHIA TVGRAMSSYE DEAYDIMRSL
601: DVNYVLVVFG GVTGYSSDDI NKFLWMVRIG GGVYPVIKEP DYLVNGEFRV DKGASPKMLN CLMYKLCYYR FGELVTEYGK PTGYDRARGV EIGNKDIKLE
701: HLEEAYTTSN WIVRIYRVKP PTNRL
101: LYPGLMVTAA LIYWTLRFLR FFVHIREVCV LTAPFFASNT TIVAYFFGKE IWDTGAGLVA AALIAICPGY ISRSVAGSYD NEAVAIFALL LTFYLFVKAV
201: KTGSLSWALG SAFGYFYMVS AWGGYVFIIN LVPLYVLVLL ITGRYSMRLY VAYNCMYILG MLLAMQIRFV GFQHVQSGEH MGAMGVFLLM QVFYFLDWVK
301: YQLNDTKLFQ TFLRITVTSA ILVGGIALGV GTASGYISPW TGRFYSLLDP TYAKDHIPII ASVSEHQPTA WSSFMFDYHI LLFLFPAGLY FCFKRLSDAT
401: IFIVMYGLTS LYFAGVMVRL ILVATPAVCL ISAIAVSATV KNLTSLLRTK QKVPQTGSTK GVGSSKSSSK VTLDQSQPFQ KNGAIALLVG VFYLLSRYAI
501: HCTWVTSEAY SSPSIVLAAR GAHGNRIIFD DYREAYYWLR QNTPTDAKVM SWWDYGYQIT AMGNRTVIVD NNTWNNTHIA TVGRAMSSYE DEAYDIMRSL
601: DVNYVLVVFG GVTGYSSDDI NKFLWMVRIG GGVYPVIKEP DYLVNGEFRV DKGASPKMLN CLMYKLCYYR FGELVTEYGK PTGYDRARGV EIGNKDIKLE
701: HLEEAYTTSN WIVRIYRVKP PTNRL
001: MGGKSEPAKS ESMATKPDLL NTSFFSFKSL KLKTKQQELL LRISILGLVY ILAFIARLFS VLRYESMIHE FDPYFNYRTT LFLTEKGFYE FWNWFDSESW
101: YPLGRIIGGT LYPGLMVTAA LIYWTLRFLR FFVHIREVCV LTAPFFASNT TLVAYFFGKE LWDTGAGLVA AVLIAICPGY ISRSVAGSYD NEAVAIFALL
201: LTFYLFVKAV NTGSLAWALA SAFGYFYMVS AWGGYVFIIN LVPLYVLVLL ITGRYSMRLY IAYNCMYILG MLLAMQIRFV GFQHVQSGEH MGAMGVFLLM
301: QVFYFLDWVK YQLNDTKLFQ TFLRITVTSA ILVGGVAVGV GTASGYISPW TGRFYSLLDP TYAKDHIPII ASVSEHQPTA WSSFMFDYHI LLFLFPAGLY
401: FCFKRLTDAT IFIVMYGLTS LYFAGVMVRL ILVATPAVCL ISAIAVSATI KNLTSLLRTK QKVSQTGSTK GAGSSKASSK VTLDQSQPFQ KNGAIALLVG
501: VFYLLSRYAI HCTWVTAEAY SSPSIVLAAR GAHGNRIIFD DYREAYYWLR QNTATDAKIM SWWDYGYQIT AMGNRTVIVD NNTWNNTHIA TVGRAMSSYE
601: DDAYDIMRSL DVNYVLVVFG GVTGYSSDDI NKFLWMVRIG GGVFPVIKEP DYLVNGEFRV DKGASPKMLN CLMYKLCYYR FGELTTEYGK PPGYDRARGV
701: EIGNKDIKLE HLEEAYTTSN WIVRIYRVKP PTNRL
101: YPLGRIIGGT LYPGLMVTAA LIYWTLRFLR FFVHIREVCV LTAPFFASNT TLVAYFFGKE LWDTGAGLVA AVLIAICPGY ISRSVAGSYD NEAVAIFALL
201: LTFYLFVKAV NTGSLAWALA SAFGYFYMVS AWGGYVFIIN LVPLYVLVLL ITGRYSMRLY IAYNCMYILG MLLAMQIRFV GFQHVQSGEH MGAMGVFLLM
301: QVFYFLDWVK YQLNDTKLFQ TFLRITVTSA ILVGGVAVGV GTASGYISPW TGRFYSLLDP TYAKDHIPII ASVSEHQPTA WSSFMFDYHI LLFLFPAGLY
401: FCFKRLTDAT IFIVMYGLTS LYFAGVMVRL ILVATPAVCL ISAIAVSATI KNLTSLLRTK QKVSQTGSTK GAGSSKASSK VTLDQSQPFQ KNGAIALLVG
501: VFYLLSRYAI HCTWVTAEAY SSPSIVLAAR GAHGNRIIFD DYREAYYWLR QNTATDAKIM SWWDYGYQIT AMGNRTVIVD NNTWNNTHIA TVGRAMSSYE
601: DDAYDIMRSL DVNYVLVVFG GVTGYSSDDI NKFLWMVRIG GGVFPVIKEP DYLVNGEFRV DKGASPKMLN CLMYKLCYYR FGELTTEYGK PPGYDRARGV
701: EIGNKDIKLE HLEEAYTTSN WIVRIYRVKP PTNRL
Arabidopsis Description
STT3BGlycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PVA0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.