Factsheet for Zm00001d001846_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
golgi 1
mitochondrion 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 23508561

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026607_P002	Maize	plasma membrane	97.5	97.36
Os04t0675500-01	Rice	plasma membrane	95.69	95.42
TraesCS2D01G558800.1	Wheat	plasma membrane	94.71	94.19
TraesCS2A01G555600.1	Wheat	golgi	94.16	93.77
TraesCS2B01G587900.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	94.02	93.5
GSMUA_Achr3P00140_001	Banana	endoplasmic reticulum, golgi	73.3	88.42
KRH38891	Soybean	endoplasmic reticulum	86.37	85.19
PGSC0003DMT400026302	Potato	endoplasmic reticulum, golgi, plasma membrane	85.4	84.69
Solyc03g098600.2.1	Tomato	nucleus, plastid, unclear	85.4	84.69
KRH09394	Soybean	endoplasmic reticulum, mitochondrion	86.09	84.45
CDY15314	Canola	plasma membrane	84.98	84.28
CDX93729	Canola	peroxisome, plasma membrane, plastid, vacuole	84.84	84.14
Bra028034.1-P	Field mustard	golgi, plasma membrane, plastid, vacuole	84.7	84.0
VIT_17s0053g00140.t01	Wine grape	plasma membrane	85.4	82.86
AT1G34130.1	Thale cress	plasma membrane	84.42	82.58
HORVU2Hr1G119980.1	Barley	cytosol	73.85	80.21
CDY28395	Canola	endoplasmic reticulum, peroxisome, plasma membrane	50.07	74.07
Bra034441.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	47.01	65.89
Zm00001d043441_P002	Maize	plasma membrane	53.27	49.74
Zm00001d038804_P002	Maize	plasma membrane	54.24	46.43

Protein Annotations

EntrezGene:100382512	MapMan:18.1.1.5.7	Gene3D:3.40.50.12610	EMBL:BT064584	UniProt:C0P8G5	GO:GO:0003674
GO:GO:0003824	GO:GO:0004576	GO:GO:0005575	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0019538	ProteinID:ONM12162.1	InterPro:Oligo_trans_STT3	PFAM:PF02516	PANTHER:PTHR13872
PANTHER:PTHR13872:SF38	TMHMM:TMhelix	UniParc:UPI00019490CE	EnsemblPlantsGene:Zm00001d001846	EnsemblPlants:Zm00001d001846_P001	EnsemblPlants:Zm00001d001846_T001
SEG:seg	:	:	:	:	:

Description

Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B

Coordinates

chr2:+:1767080..1772657

Molecular Weight (calculated)

80816.6 Da

IEP (calculated)

9.032

GRAVY (calculated)

0.354

Length

719 amino acids

Sequence
(BLAST)

001: MAPPALDSLP APLRSLRLKT KQQELLLRVS ALALIYVLAF AVRLFSVLRY ESMIHEFDPY FNYRTTLFLT ENGFSEFWNW FDFESWYPLG RVVGGTLYPG
101: LMVTAALLHR LLRALYLTVH IREVCVLTAP FFAANTTLVA YAFGREIWDS GAGLVAAALI AIVPGYISRS VAGSYDNEGV AIFALLLTFY LFVRAVNTGS
201: LAWALASAFG YFYMVSAWGG YVFIINLVPL YVLVLLVTGR YSQRLYVAYN CMYVLGMLLA MQIRFVGFQH VQSGEHMAAM GVFFLLQVFF FLDWVKYLLN
301: DARLFKSFLR ITLTCVITIG TLALGLGTAS GYISPWTGRF YSLLDPTYAK DHIPIIASVS EHQPTAWSSF MFDFHILLFL FPAGLYFCFK RLSDATIFIV
401: MYGLTTMYFA GVMVRLILVA APAVCLISAI AASATIKNLT TLIRTKSKSP QTTGKTTGSK AGAKGAVDQS LPFQHNAAIA LLLGAFYLLS RYAIHCTWVT
501: SEAYSSPSIV LAARGHNGGR VIFDDYREAY YWLRQNTPPD AKIMSWWDYG YQITAMGNRT VIVDNNTWNN THIATVGRAM SSYEDEAYEI MQSLDVNYVL
601: VVFGGVTGYS SDDINKFLWM VRIGGGVFPV IKEPDYLVNG EYRIDKGAAP KMLNCLMYKL CYYRFGELTT EYGKPPGYDR VRGVEIGNKD IKLEYLEEAF
701: TTSNWIVRIY KVKPPKNRS

Best Arabidopsis Sequence Match ( AT1G34130.1 )
(BLAST)

001: MGGKSEPAKS ESMATKPDLL NTSFFSFKSL KLKTKQQELL LRISILGLVY ILAFIARLFS VLRYESMIHE FDPYFNYRTT LFLTEKGFYE FWNWFDSESW
101: YPLGRIIGGT LYPGLMVTAA LIYWTLRFLR FFVHIREVCV LTAPFFASNT TLVAYFFGKE LWDTGAGLVA AVLIAICPGY ISRSVAGSYD NEAVAIFALL
201: LTFYLFVKAV NTGSLAWALA SAFGYFYMVS AWGGYVFIIN LVPLYVLVLL ITGRYSMRLY IAYNCMYILG MLLAMQIRFV GFQHVQSGEH MGAMGVFLLM
301: QVFYFLDWVK YQLNDTKLFQ TFLRITVTSA ILVGGVAVGV GTASGYISPW TGRFYSLLDP TYAKDHIPII ASVSEHQPTA WSSFMFDYHI LLFLFPAGLY
401: FCFKRLTDAT IFIVMYGLTS LYFAGVMVRL ILVATPAVCL ISAIAVSATI KNLTSLLRTK QKVSQTGSTK GAGSSKASSK VTLDQSQPFQ KNGAIALLVG
501: VFYLLSRYAI HCTWVTAEAY SSPSIVLAAR GAHGNRIIFD DYREAYYWLR QNTATDAKIM SWWDYGYQIT AMGNRTVIVD NNTWNNTHIA TVGRAMSSYE
601: DDAYDIMRSL DVNYVLVVFG GVTGYSSDDI NKFLWMVRIG GGVFPVIKEP DYLVNGEFRV DKGASPKMLN CLMYKLCYYR FGELTTEYGK PPGYDRARGV
701: EIGNKDIKLE HLEEAYTTSN WIVRIYRVKP PTNRL

Arabidopsis Description

STT3BGlycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PVA0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.