Factsheet for VIT_17s0053g00140.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
golgi 3
mitochondrion 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	golgi
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g098600.2.1	Tomato	nucleus, plastid, unclear	89.2	91.17
PGSC0003DMT400026302	Potato	endoplasmic reticulum, golgi, plasma membrane	89.07	91.03
GSMUA_Achr3P00140_001	Banana	endoplasmic reticulum, golgi	72.47	90.1
CDY15314	Canola	plasma membrane	86.77	88.69
KRH38891	Soybean	endoplasmic reticulum	87.04	88.48
Bra028034.1-P	Field mustard	golgi, plasma membrane, plastid, vacuole	86.37	88.28
KRH09394	Soybean	endoplasmic reticulum, mitochondrion	87.04	87.99
CDX93729	Canola	peroxisome, plasma membrane, plastid, vacuole	85.96	87.86
AT1G34130.1	Thale cress	plasma membrane	86.5	87.21
EES13093	Sorghum	endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid	83.27	85.69
Zm00001d026607_P002	Maize	plasma membrane	83.0	85.42
Zm00001d001846_P001	Maize	plasma membrane	82.86	85.4
Os04t0675500-01	Rice	plasma membrane	82.73	85.02
TraesCS2D01G558800.1	Wheat	plasma membrane	81.78	83.82
TraesCS2B01G587900.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	81.38	83.4
TraesCS2A01G555600.1	Wheat	golgi	81.24	83.38
CDY28395	Canola	endoplasmic reticulum, peroxisome, plasma membrane	51.42	78.4
HORVU2Hr1G119980.1	Barley	cytosol	65.86	73.72
Bra034441.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	48.31	69.79
VIT_11s0016g01590.t01	Wine grape	endoplasmic reticulum	9.45	58.82
VIT_12s0028g03220.t01	Wine grape	cytosol	3.1	52.27
VIT_11s0016g03320.t01	Wine grape	plasma membrane	51.42	48.97
VIT_03s0088g00210.t01	Wine grape	mitochondrion	10.39	38.89
VIT_07s0005g06040.t01	Wine grape	golgi, mitochondrion, nucleus	1.89	33.33

Protein Annotations

EntrezGene:100261650	wikigene:100261650	MapMan:18.1.1.5.7	Gene3D:3.40.50.12610	EMBL:AM449068	ProteinID:CAN67600
ProteinID:CAN67600.1	ProteinID:CCB58778	ProteinID:CCB58778.1	UniProt:F6HVR5	EMBL:FN596258	GO:GO:0003674
GO:GO:0003824	GO:GO:0004576	GO:GO:0004579	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150
GO:GO:0008152	GO:GO:0008250	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0018279	GO:GO:0019538	GO:GO:0043687	EntrezGene:LOC100261650	wikigene:LOC100261650
InterPro:Oligo_trans_STT3	PFAM:PF02516	PANTHER:PTHR13872	PANTHER:PTHR13872:SF38	TIGR:TC53661	TMHMM:TMhelix
UniParc:UPI00015CC04B	ArrayExpress:VIT_17s0053g00140	EnsemblPlantsGene:VIT_17s0053g00140	EnsemblPlants:VIT_17s0053g00140.t01	unigene:Vvi.7700	RefSeq:XP_002269119
RefSeq:XP_002269119.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr17:+:14645194..14654757

Molecular Weight (calculated)

83371.6 Da

IEP (calculated)

9.105

GRAVY (calculated)

0.322

Length

741 amino acids

Sequence
(BLAST)

001: MVGKMEAVNG VKSGSNSTAS TFQSAFFKPD LSLKSLKLKT KQQELLIRVS ILTLVYILAF ITRLFSVLRY ESMIHEFDPY FNYRTTVFLT EKGFYEFWNW
101: FDSESWYPLG RIIGGTLYPG LMVTAALIYS IIRFLRFAVH IREVCVLTAP FFASNTTIVA YFFGKELWDS GAGLVAAALI AICPGYISRS VAGSYDNEGV
201: AIFALLLTFY LFVKAVNTGS LAWALASAFG YFYMVSAWGG YVFIINLIPL YAMVLLITGR YSMRLYVAYN CMYILGMLLA MQIRFVGFQH VQSGEHMAAM
301: GVFFLMQVFY FLDWVKHLLS DTKLFQAFLR ITVTCAVGVG AIALGVGTAS GYISPWTGRF YSLLDPTYAK DHIPIIASVS EHQPTAWSSF MFDFHILLFL
401: FPAGLYFCFK RLSDATIFIV MYGLTSMYFA GVMVRLILVA TPAMCLISAI AVSATIKNLT QLVRTKSKVA HTGSTKGTTS GKASSKASLD QSLPFQRNGA
501: IALLIGAFYL LCKYATHCTW VTSEAYSSPS IVLAARGAYG NRVIFDDYRE AYFWLRQNTP PDAKVMSWWD YGYQITAMGN RTVIVDNNTW NNTHIATVGR
601: AMSSYEDEAY EIMRSLDVDY VLVVFGGVTG YSSDDINKFL WMVRIGGGVF PVIKEPDYLV NGEYRVDKGA APKMLNCLMY KLSYYRFGEL QTEYGKPPGY
701: DRARGVEIGN KDIKLEYLEE AFTTSNWIVR IYKVKPPNNR W

Best Arabidopsis Sequence Match ( AT1G34130.1 )
(BLAST)

001: MGGKSEPAKS ESMATKPDLL NTSFFSFKSL KLKTKQQELL LRISILGLVY ILAFIARLFS VLRYESMIHE FDPYFNYRTT LFLTEKGFYE FWNWFDSESW
101: YPLGRIIGGT LYPGLMVTAA LIYWTLRFLR FFVHIREVCV LTAPFFASNT TLVAYFFGKE LWDTGAGLVA AVLIAICPGY ISRSVAGSYD NEAVAIFALL
201: LTFYLFVKAV NTGSLAWALA SAFGYFYMVS AWGGYVFIIN LVPLYVLVLL ITGRYSMRLY IAYNCMYILG MLLAMQIRFV GFQHVQSGEH MGAMGVFLLM
301: QVFYFLDWVK YQLNDTKLFQ TFLRITVTSA ILVGGVAVGV GTASGYISPW TGRFYSLLDP TYAKDHIPII ASVSEHQPTA WSSFMFDYHI LLFLFPAGLY
401: FCFKRLTDAT IFIVMYGLTS LYFAGVMVRL ILVATPAVCL ISAIAVSATI KNLTSLLRTK QKVSQTGSTK GAGSSKASSK VTLDQSQPFQ KNGAIALLVG
501: VFYLLSRYAI HCTWVTAEAY SSPSIVLAAR GAHGNRIIFD DYREAYYWLR QNTATDAKIM SWWDYGYQIT AMGNRTVIVD NNTWNNTHIA TVGRAMSSYE
601: DDAYDIMRSL DVNYVLVVFG GVTGYSSDDI NKFLWMVRIG GGVFPVIKEP DYLVNGEFRV DKGASPKMLN CLMYKLCYYR FGELTTEYGK PPGYDRARGV
701: EIGNKDIKLE HLEEAYTTSN WIVRIYRVKP PTNRL

Arabidopsis Description

STT3BGlycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PVA0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.