Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 3
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G555600.1 | Wheat | golgi | 99.17 | 99.31 |
| TraesCS2D01G558800.1 | Wheat | plasma membrane | 98.76 | 98.76 |
| Os04t0675500-01 | Rice | plasma membrane | 94.47 | 94.73 |
| EES13093 | Sorghum | endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid | 94.19 | 94.58 |
| Zm00001d001846_P001 | Maize | plasma membrane | 93.5 | 94.02 |
| Zm00001d026607_P002 | Maize | plasma membrane | 93.5 | 93.89 |
| GSMUA_Achr3P00140_001 | Banana | endoplasmic reticulum, golgi | 72.75 | 88.25 |
| Solyc03g098600.2.1 | Tomato | nucleus, plastid, unclear | 84.65 | 84.41 |
| HORVU2Hr1G119980.1 | Barley | cytosol | 77.18 | 84.29 |
| PGSC0003DMT400026302 | Potato | endoplasmic reticulum, golgi, plasma membrane | 84.23 | 84.0 |
| KRH38891 | Soybean | endoplasmic reticulum | 84.37 | 83.68 |
| CDY15314 | Canola | plasma membrane | 83.68 | 83.45 |
| KRH09394 | Soybean | endoplasmic reticulum, mitochondrion | 84.37 | 83.22 |
| CDX93729 | Canola | peroxisome, plasma membrane, plastid, vacuole | 83.26 | 83.03 |
| Bra028034.1-P | Field mustard | golgi, plasma membrane, plastid, vacuole | 83.13 | 82.9 |
| VIT_17s0053g00140.t01 | Wine grape | plasma membrane | 83.4 | 81.38 |
| AT1G34130.1 | Thale cress | plasma membrane | 82.71 | 81.36 |
| CDY28395 | Canola | endoplasmic reticulum, peroxisome, plasma membrane | 49.79 | 74.07 |
| Bra034441.1-P | Field mustard | endoplasmic reticulum, golgi, plasma membrane | 46.75 | 65.89 |
| TraesCS1B01G352700.1 | Wheat | golgi | 52.56 | 48.22 |
| TraesCS3B01G308200.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 41.22 | 45.64 |
Protein Annotations
| MapMan:18.1.1.5.7 | Gene3D:3.40.50.12610 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004576 | GO:GO:0005575 |
| GO:GO:0005975 | GO:GO:0006464 | GO:GO:0006486 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 | GO:GO:0019538 | InterPro:Oligo_trans_STT3 | PFAM:PF02516 |
| PANTHER:PTHR13872 | PANTHER:PTHR13872:SF38 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2B01G587900 | EnsemblPlants:TraesCS2B01G587900.1 | SEG:seg |
Description
No Description!
Coordinates
chr2B:-:774953152..774959023
Molecular Weight (calculated)
81142.0 Da
IEP (calculated)
8.972
GRAVY (calculated)
0.354
Length
723 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAATTMLD SLPAPLLRAL RLKTKQQELL LRVSALALVY VLAFAVRLFS VLRYESMIHE FDPYFNYRTT LYLTEHGYSE FWNWFDHESW YPLGRVVGGT
101: LFPGLMVTAA LLHRLLRALS LAVHIREVCV LTAPFFAANT TLVAYAFGRE IWDSGAGLVA AALIAVCPGY ISRSVAGSYD NEGVAIFALL LTFYLFVRAV
201: NTGSLAWSLA AAFGYFYMVS AWGGYVFIIN LLPLYVLVLL VTGRYSQRLY VAYNCTYVLG MLLGMQIRFV GFQHVQSGEH MAAMGVFFLL QVFFFLDWVK
301: YMLNDVKLFK SFLRITLTCV ISVGTLALGI GTASGYISPW TGRFYSLLDP TYAKDHIPII ASVSEHQPTA WSSFMFDFHI LLFLFPAGLY FCFKRLSDAT
401: IFIVMYGLTS MYFAGVMVRL ILVAAPAVCL ISAIAVSATI KNLTTLIRSK SRSPQTTGKT TGSKAAAKGA VDQPLPFQHN VAVALLLGAF YLLSRYAIHC
501: TWVTSEAYSS PSIVLSARGH NGGRVIFDDY REAYYWLRQN TPTDAKIMSW WDYGYQITAM GNRTVIVDNN TWNNTHIATV GRAMSSYEDE AYEIMQSLDV
601: NYVLVVFGGV TGYSSDDINK FLWMVRIGGG VFPVIKEPDY LVNGEYRVDK GASPKMLNCL MYKLCYYRFG ELTTEYGKPP GYDRVRGVEI GNKDIKLEYL
701: EEAFTTSNWI VRIYKVKPPK NRS
101: LFPGLMVTAA LLHRLLRALS LAVHIREVCV LTAPFFAANT TLVAYAFGRE IWDSGAGLVA AALIAVCPGY ISRSVAGSYD NEGVAIFALL LTFYLFVRAV
201: NTGSLAWSLA AAFGYFYMVS AWGGYVFIIN LLPLYVLVLL VTGRYSQRLY VAYNCTYVLG MLLGMQIRFV GFQHVQSGEH MAAMGVFFLL QVFFFLDWVK
301: YMLNDVKLFK SFLRITLTCV ISVGTLALGI GTASGYISPW TGRFYSLLDP TYAKDHIPII ASVSEHQPTA WSSFMFDFHI LLFLFPAGLY FCFKRLSDAT
401: IFIVMYGLTS MYFAGVMVRL ILVAAPAVCL ISAIAVSATI KNLTTLIRSK SRSPQTTGKT TGSKAAAKGA VDQPLPFQHN VAVALLLGAF YLLSRYAIHC
501: TWVTSEAYSS PSIVLSARGH NGGRVIFDDY REAYYWLRQN TPTDAKIMSW WDYGYQITAM GNRTVIVDNN TWNNTHIATV GRAMSSYEDE AYEIMQSLDV
601: NYVLVVFGGV TGYSSDDINK FLWMVRIGGG VFPVIKEPDY LVNGEYRVDK GASPKMLNCL MYKLCYYRFG ELTTEYGKPP GYDRVRGVEI GNKDIKLEYL
701: EEAFTTSNWI VRIYKVKPPK NRS
001: MGGKSEPAKS ESMATKPDLL NTSFFSFKSL KLKTKQQELL LRISILGLVY ILAFIARLFS VLRYESMIHE FDPYFNYRTT LFLTEKGFYE FWNWFDSESW
101: YPLGRIIGGT LYPGLMVTAA LIYWTLRFLR FFVHIREVCV LTAPFFASNT TLVAYFFGKE LWDTGAGLVA AVLIAICPGY ISRSVAGSYD NEAVAIFALL
201: LTFYLFVKAV NTGSLAWALA SAFGYFYMVS AWGGYVFIIN LVPLYVLVLL ITGRYSMRLY IAYNCMYILG MLLAMQIRFV GFQHVQSGEH MGAMGVFLLM
301: QVFYFLDWVK YQLNDTKLFQ TFLRITVTSA ILVGGVAVGV GTASGYISPW TGRFYSLLDP TYAKDHIPII ASVSEHQPTA WSSFMFDYHI LLFLFPAGLY
401: FCFKRLTDAT IFIVMYGLTS LYFAGVMVRL ILVATPAVCL ISAIAVSATI KNLTSLLRTK QKVSQTGSTK GAGSSKASSK VTLDQSQPFQ KNGAIALLVG
501: VFYLLSRYAI HCTWVTAEAY SSPSIVLAAR GAHGNRIIFD DYREAYYWLR QNTATDAKIM SWWDYGYQIT AMGNRTVIVD NNTWNNTHIA TVGRAMSSYE
601: DDAYDIMRSL DVNYVLVVFG GVTGYSSDDI NKFLWMVRIG GGVFPVIKEP DYLVNGEFRV DKGASPKMLN CLMYKLCYYR FGELTTEYGK PPGYDRARGV
701: EIGNKDIKLE HLEEAYTTSN WIVRIYRVKP PTNRL
101: YPLGRIIGGT LYPGLMVTAA LIYWTLRFLR FFVHIREVCV LTAPFFASNT TLVAYFFGKE LWDTGAGLVA AVLIAICPGY ISRSVAGSYD NEAVAIFALL
201: LTFYLFVKAV NTGSLAWALA SAFGYFYMVS AWGGYVFIIN LVPLYVLVLL ITGRYSMRLY IAYNCMYILG MLLAMQIRFV GFQHVQSGEH MGAMGVFLLM
301: QVFYFLDWVK YQLNDTKLFQ TFLRITVTSA ILVGGVAVGV GTASGYISPW TGRFYSLLDP TYAKDHIPII ASVSEHQPTA WSSFMFDYHI LLFLFPAGLY
401: FCFKRLTDAT IFIVMYGLTS LYFAGVMVRL ILVATPAVCL ISAIAVSATI KNLTSLLRTK QKVSQTGSTK GAGSSKASSK VTLDQSQPFQ KNGAIALLVG
501: VFYLLSRYAI HCTWVTAEAY SSPSIVLAAR GAHGNRIIFD DYREAYYWLR QNTATDAKIM SWWDYGYQIT AMGNRTVIVD NNTWNNTHIA TVGRAMSSYE
601: DDAYDIMRSL DVNYVLVVFG GVTGYSSDDI NKFLWMVRIG GGVFPVIKEP DYLVNGEFRV DKGASPKMLN CLMYKLCYYR FGELTTEYGK PPGYDRARGV
701: EIGNKDIKLE HLEEAYTTSN WIVRIYRVKP PTNRL
Arabidopsis Description
STT3BGlycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PVA0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.