Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 5
- golgi 4
- plastid 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
plasma membrane:
18260611
plasma membrane: 27800704 |
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
EES13093 | Sorghum | endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid | 96.26 | 96.39 |
Zm00001d026607_P002 | Maize | plasma membrane | 95.84 | 95.97 |
Zm00001d001846_P001 | Maize | plasma membrane | 95.42 | 95.69 |
TraesCS2D01G558800.1 | Wheat | plasma membrane | 95.42 | 95.16 |
TraesCS2A01G555600.1 | Wheat | golgi | 95.01 | 94.88 |
TraesCS2B01G587900.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 94.73 | 94.47 |
GSMUA_Achr3P00140_001 | Banana | endoplasmic reticulum, golgi | 73.79 | 89.26 |
Solyc03g098600.2.1 | Tomato | nucleus, plastid, unclear | 85.71 | 85.24 |
PGSC0003DMT400026302 | Potato | endoplasmic reticulum, golgi, plasma membrane | 85.58 | 85.1 |
KRH38891 | Soybean | endoplasmic reticulum | 85.58 | 84.64 |
KRH09394 | Soybean | endoplasmic reticulum, mitochondrion | 85.44 | 84.04 |
CDY15314 | Canola | plasma membrane | 84.33 | 83.86 |
CDX93729 | Canola | peroxisome, plasma membrane, plastid, vacuole | 84.33 | 83.86 |
Bra028034.1-P | Field mustard | golgi, plasma membrane, plastid, vacuole | 84.05 | 83.59 |
VIT_17s0053g00140.t01 | Wine grape | plasma membrane | 85.02 | 82.73 |
AT1G34130.1 | Thale cress | plasma membrane | 83.91 | 82.31 |
HORVU2Hr1G119980.1 | Barley | cytosol | 74.2 | 80.82 |
CDY28395 | Canola | endoplasmic reticulum, peroxisome, plasma membrane | 50.62 | 75.1 |
Bra034441.1-P | Field mustard | endoplasmic reticulum, golgi, plasma membrane | 47.57 | 66.86 |
Os05t0519900-02 | Rice | endoplasmic reticulum, golgi | 53.95 | 48.08 |
Protein Annotations
MapMan:18.1.1.5.7 | Gene3D:3.40.50.12610 | EntrezGene:4337389 | EMBL:AK099138 | ProteinID:BAF16162.1 | ProteinID:BAS91617.1 |
ProteinID:CAE03245.2 | ProteinID:EAZ32398.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004576 | GO:GO:0004579 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 |
GO:GO:0005886 | GO:GO:0005975 | GO:GO:0006464 | GO:GO:0006486 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0008250 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 |
GO:GO:0016757 | GO:GO:0018279 | GO:GO:0019538 | GO:GO:0043687 | InterPro:Oligo_trans_STT3 | EnsemblPlantsGene:Os04g0675500 |
EnsemblPlants:Os04t0675500-01 | PFAM:PF02516 | PANTHER:PTHR13872 | PANTHER:PTHR13872:SF38 | UniProt:Q7XQ88 | TMHMM:TMhelix |
UniParc:UPI00001B14DB | RefSeq:XP_015635991.1 | SEG:seg | : | : | : |
Description
oligosaccharyltransferase subunit Stt3aSimilar to Itm1 protein. (Os04t0675500-01);Non-protein coding transcript. (Os04t0675500-02);Similar to Itm1 protein. (Os04t0675500-03)
Coordinates
chr4:-:34492078..34496501
Molecular Weight (calculated)
80736.3 Da
IEP (calculated)
9.044
GRAVY (calculated)
0.372
Length
721 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAATALDSL PAPLRSLRLK TKQQELLLRV SALALIYVLA FVVRLFSVLR YESMIHEFDP YFNYRTTLFL SDHGFSEFWN WFDFESWYPL GRVVGGTLFP
101: GLMVTAALLH RLLRALSLAV HIREVCVLTA PFFAANTTLV AYAFGREIWD SGAGLVAAAL IAVCPGYISR SVAGSYDNEG VAIFALLLTF YLFVRAVNTG
201: SLAWSLASAF GYFYMVSAWG GYVFIINLLP LYVLVLLVTG RYSQRLYVAY NSTYVLGMLL AMQIRFVGFQ HVQSGEHMAA MGVFFLLQVF FFLDWVKYLL
301: NDAKLFKSFL RITLTCVITV GTLALGIGTA SGYISPWTGR FYSLLDPTYA KDHIPIIASV SEHQPTAWSS FMFDFHILLF LFPAGLYFCF KRLSDATIFI
401: VMYGLTSMYF AGVMVRLILV AAPAVCLISA IAASATIKNL TTLIRTKSKS PQTVSGKSSG SKAAAKGAVD QSLPFQQNVA IALLLGAFYL LSRYAVHCTW
501: VTSEAYSSPS IVLAARGHNG GRVIFDDYRE AYYWLRQNTP SDAKIMSWWD YGYQITAMGN RTVIVDNNTW NNTHIATVGR AMSSYEDEAY EIMQSLDVNY
601: VLVVFGGVTG YSSDDINKFL WMVRIGGGVF PVIKEPDYLV NGEYRVDKGA APKMLNCLMY KLCYYRFGEL TTEYGKPPGY DRVRGVEIGN KDIKLEYLEE
701: AFTTSNWIVR IYKVKPPKNR S
101: GLMVTAALLH RLLRALSLAV HIREVCVLTA PFFAANTTLV AYAFGREIWD SGAGLVAAAL IAVCPGYISR SVAGSYDNEG VAIFALLLTF YLFVRAVNTG
201: SLAWSLASAF GYFYMVSAWG GYVFIINLLP LYVLVLLVTG RYSQRLYVAY NSTYVLGMLL AMQIRFVGFQ HVQSGEHMAA MGVFFLLQVF FFLDWVKYLL
301: NDAKLFKSFL RITLTCVITV GTLALGIGTA SGYISPWTGR FYSLLDPTYA KDHIPIIASV SEHQPTAWSS FMFDFHILLF LFPAGLYFCF KRLSDATIFI
401: VMYGLTSMYF AGVMVRLILV AAPAVCLISA IAASATIKNL TTLIRTKSKS PQTVSGKSSG SKAAAKGAVD QSLPFQQNVA IALLLGAFYL LSRYAVHCTW
501: VTSEAYSSPS IVLAARGHNG GRVIFDDYRE AYYWLRQNTP SDAKIMSWWD YGYQITAMGN RTVIVDNNTW NNTHIATVGR AMSSYEDEAY EIMQSLDVNY
601: VLVVFGGVTG YSSDDINKFL WMVRIGGGVF PVIKEPDYLV NGEYRVDKGA APKMLNCLMY KLCYYRFGEL TTEYGKPPGY DRVRGVEIGN KDIKLEYLEE
701: AFTTSNWIVR IYKVKPPKNR S
001: MGGKSEPAKS ESMATKPDLL NTSFFSFKSL KLKTKQQELL LRISILGLVY ILAFIARLFS VLRYESMIHE FDPYFNYRTT LFLTEKGFYE FWNWFDSESW
101: YPLGRIIGGT LYPGLMVTAA LIYWTLRFLR FFVHIREVCV LTAPFFASNT TLVAYFFGKE LWDTGAGLVA AVLIAICPGY ISRSVAGSYD NEAVAIFALL
201: LTFYLFVKAV NTGSLAWALA SAFGYFYMVS AWGGYVFIIN LVPLYVLVLL ITGRYSMRLY IAYNCMYILG MLLAMQIRFV GFQHVQSGEH MGAMGVFLLM
301: QVFYFLDWVK YQLNDTKLFQ TFLRITVTSA ILVGGVAVGV GTASGYISPW TGRFYSLLDP TYAKDHIPII ASVSEHQPTA WSSFMFDYHI LLFLFPAGLY
401: FCFKRLTDAT IFIVMYGLTS LYFAGVMVRL ILVATPAVCL ISAIAVSATI KNLTSLLRTK QKVSQTGSTK GAGSSKASSK VTLDQSQPFQ KNGAIALLVG
501: VFYLLSRYAI HCTWVTAEAY SSPSIVLAAR GAHGNRIIFD DYREAYYWLR QNTATDAKIM SWWDYGYQIT AMGNRTVIVD NNTWNNTHIA TVGRAMSSYE
601: DDAYDIMRSL DVNYVLVVFG GVTGYSSDDI NKFLWMVRIG GGVFPVIKEP DYLVNGEFRV DKGASPKMLN CLMYKLCYYR FGELTTEYGK PPGYDRARGV
701: EIGNKDIKLE HLEEAYTTSN WIVRIYRVKP PTNRL
101: YPLGRIIGGT LYPGLMVTAA LIYWTLRFLR FFVHIREVCV LTAPFFASNT TLVAYFFGKE LWDTGAGLVA AVLIAICPGY ISRSVAGSYD NEAVAIFALL
201: LTFYLFVKAV NTGSLAWALA SAFGYFYMVS AWGGYVFIIN LVPLYVLVLL ITGRYSMRLY IAYNCMYILG MLLAMQIRFV GFQHVQSGEH MGAMGVFLLM
301: QVFYFLDWVK YQLNDTKLFQ TFLRITVTSA ILVGGVAVGV GTASGYISPW TGRFYSLLDP TYAKDHIPII ASVSEHQPTA WSSFMFDYHI LLFLFPAGLY
401: FCFKRLTDAT IFIVMYGLTS LYFAGVMVRL ILVATPAVCL ISAIAVSATI KNLTSLLRTK QKVSQTGSTK GAGSSKASSK VTLDQSQPFQ KNGAIALLVG
501: VFYLLSRYAI HCTWVTAEAY SSPSIVLAAR GAHGNRIIFD DYREAYYWLR QNTATDAKIM SWWDYGYQIT AMGNRTVIVD NNTWNNTHIA TVGRAMSSYE
601: DDAYDIMRSL DVNYVLVVFG GVTGYSSDDI NKFLWMVRIG GGVFPVIKEP DYLVNGEFRV DKGASPKMLN CLMYKLCYYR FGELTTEYGK PPGYDRARGV
701: EIGNKDIKLE HLEEAYTTSN WIVRIYRVKP PTNRL
Arabidopsis Description
STT3BGlycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PVA0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.